Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL355596.1-201ENST00000565399 3996 ntBASIC3.61□□□□□ -1.83
MRE11P49959 AP000560.1-201ENST00000624150 1937 ntBASIC3.6□□□□□ -1.83
MRE11P49959 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.6□□□□□ -1.83
MRE11P49959 RNU6-227P-201ENST00000362865 103 ntBASIC3.6□□□□□ -1.83
MRE11P49959 RNU6-78P-201ENST00000362897 107 ntBASIC3.6□□□□□ -1.83
MRE11P49959 RNU6-336P-201ENST00000364891 107 ntBASIC3.6□□□□□ -1.83
MRE11P49959 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MRE11P49959 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.6□□□□□ -1.83
MRE11P49959 RNU6-708P-201ENST00000384217 107 ntBASIC3.6□□□□□ -1.83
MRE11P49959 RNU6-72P-201ENST00000384285 79 ntBASIC3.6□□□□□ -1.83
MRE11P49959 Y_RNA.471-201ENST00000384312 102 ntBASIC3.6□□□□□ -1.83
MRE11P49959 AC092047.1-201ENST00000424997 240 ntBASIC3.6□□□□□ -1.83
MRE11P49959 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MRE11P49959 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.6□□□□□ -1.83
MRE11P49959 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.6□□□□□ -1.83
MRE11P49959 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.6□□□□□ -1.83
MRE11P49959 AC130454.1-201ENST00000622948 401 ntBASIC3.6□□□□□ -1.83
MRE11P49959 AC027309.3-201ENST00000623419 351 ntBASIC3.6□□□□□ -1.83
MRE11P49959 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
MRE11P49959 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MRE11P49959 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MRE11P49959 MIR325-201ENST00000385260 98 ntBASIC3.59□□□□□ -1.83
MRE11P49959 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MRE11P49959 AL357075.1-201ENST00000404107 726 ntBASIC3.59□□□□□ -1.83
MRE11P49959 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.59□□□□□ -1.83
MRE11P49959 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.59□□□□□ -1.83
MRE11P49959 MTCO3P29-201ENST00000432119 779 ntBASIC3.59□□□□□ -1.83
MRE11P49959 RPEP5-201ENST00000441137 268 ntBASIC3.59□□□□□ -1.83
MRE11P49959 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.59□□□□□ -1.83
MRE11P49959 RN7SKP210-201ENST00000459176 261 ntBASIC3.59□□□□□ -1.83
MRE11P49959 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.59□□□□□ -1.83
MRE11P49959 SCARNA4-202ENST00000625402 129 ntBASIC3.59□□□□□ -1.83
MRE11P49959 U6.99-201ENST00000637524 83 ntBASIC3.59□□□□□ -1.83
MRE11P49959 U6.104-201ENST00000637979 90 ntBASIC3.59□□□□□ -1.83
MRE11P49959 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.59□□□□□ -1.83
MRE11P49959 FAM35BP-202ENST00000497389 3337 ntBASIC3.59□□□□□ -1.84
MRE11P49959 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.58□□□□□ -1.84
MRE11P49959 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.58□□□□□ -1.84
MRE11P49959 RNU6-611P-201ENST00000384276 104 ntBASIC3.58□□□□□ -1.84
MRE11P49959 RNU6-140P-201ENST00000384566 108 ntBASIC3.58□□□□□ -1.84
MRE11P49959 Y_RNA.552-201ENST00000384665 112 ntBASIC3.58□□□□□ -1.84
MRE11P49959 MIR493-201ENST00000385254 89 ntBASIC3.58□□□□□ -1.84
MRE11P49959 MTCYBP2-201ENST00000407745 171 ntBASIC3.58□□□□□ -1.84
MRE11P49959 RNA5SP274-201ENST00000410484 108 ntBASIC3.58□□□□□ -1.84
MRE11P49959 RNU2-38P-201ENST00000410856 79 ntBASIC3.58□□□□□ -1.84
MRE11P49959 RNU6-130P-201ENST00000411112 103 ntBASIC3.58□□□□□ -1.84
MRE11P49959 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.58□□□□□ -1.84
MRE11P49959 AL451074.5-201ENST00000415894 435 ntBASIC3.58□□□□□ -1.84
MRE11P49959 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.58□□□□□ -1.84
MRE11P49959 RPS29P6-201ENST00000438196 145 ntBASIC3.58□□□□□ -1.84
MRE11P49959 AL590664.1-201ENST00000448065 339 ntBASIC3.58□□□□□ -1.84
MRE11P49959 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MRE11P49959 LINC01399-202ENST00000458450 244 ntBASIC3.58□□□□□ -1.84
MRE11P49959 snoU13.26-201ENST00000459452 105 ntBASIC3.58□□□□□ -1.84
MRE11P49959 RPL30P14-201ENST00000482744 348 ntBASIC3.58□□□□□ -1.84
MRE11P49959 AC006445.1-201ENST00000491925 405 ntBASIC3.58□□□□□ -1.84
MRE11P49959 FCF1P8-201ENST00000510322 597 ntBASIC3.58□□□□□ -1.84
MRE11P49959 MTND1P19-201ENST00000511780 315 ntBASIC3.58□□□□□ -1.84
MRE11P49959 RNU6-703P-201ENST00000516946 107 ntBASIC3.58□□□□□ -1.84
MRE11P49959 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.58□□□□□ -1.84
MRE11P49959 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.58□□□□□ -1.84
MRE11P49959 CYCSP39-201ENST00000565821 309 ntBASIC3.58□□□□□ -1.84
MRE11P49959 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MRE11P49959 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MRE11P49959 AC092435.3-201ENST00000565538 3654 ntBASIC3.57□□□□□ -1.84
MRE11P49959 Y_RNA.14-201ENST00000362415 103 ntBASIC3.57□□□□□ -1.84
MRE11P49959 RNU1-76P-201ENST00000362903 159 ntBASIC3.57□□□□□ -1.84
MRE11P49959 Y_RNA.105-201ENST00000363182 111 ntBASIC3.57□□□□□ -1.84
MRE11P49959 Y_RNA.123-201ENST00000363338 102 ntBASIC3.57□□□□□ -1.84
MRE11P49959 Z98749.2-208ENST00000381646 500 ntBASIC3.57□□□□□ -1.84
MRE11P49959 Y_RNA.518-201ENST00000384552 113 ntBASIC3.57□□□□□ -1.84
MRE11P49959 Y_RNA.562-201ENST00000384695 113 ntBASIC3.57□□□□□ -1.84
MRE11P49959 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
MRE11P49959 SNORD17-201ENST00000390930 237 ntBASIC3.57□□□□□ -1.84
MRE11P49959 SNORA12.2-201ENST00000391040 156 ntBASIC3.57□□□□□ -1.84
MRE11P49959 RNU6-1197P-201ENST00000391183 107 ntBASIC3.57□□□□□ -1.84
MRE11P49959 RPS4XP3-201ENST00000398541 413 ntBASIC3.57□□□□□ -1.84
MRE11P49959 MIR190B-201ENST00000401119 79 ntBASIC3.57□□□□□ -1.84
MRE11P49959 Z75741.1-201ENST00000446793 314 ntBASIC3.57□□□□□ -1.84
MRE11P49959 RN7SL633P-201ENST00000488974 297 ntBASIC3.57□□□□□ -1.84
MRE11P49959 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.57□□□□□ -1.84
MRE11P49959 SNORA31.18-201ENST00000517043 134 ntBASIC3.57□□□□□ -1.84
MRE11P49959 AP003733.2-201ENST00000529409 171 ntBASIC3.57□□□□□ -1.84
MRE11P49959 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.57□□□□□ -1.84
MRE11P49959 AC104581.2-201ENST00000572227 430 ntBASIC3.57□□□□□ -1.84
MRE11P49959 MIR4782-201ENST00000577987 79 ntBASIC3.57□□□□□ -1.84
MRE11P49959 MIR3128-201ENST00000581957 66 ntBASIC3.57□□□□□ -1.84
MRE11P49959 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.57□□□□□ -1.84
MRE11P49959 AC243829.7-201ENST00000633081 225 ntBASIC3.57□□□□□ -1.84
MRE11P49959 Z75746.1-201ENST00000440243 2080 ntBASIC3.56□□□□□ -1.84
MRE11P49959 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
MRE11P49959 Y_RNA.27-201ENST00000362540 103 ntBASIC3.56□□□□□ -1.84
MRE11P49959 Y_RNA.183-201ENST00000363882 113 ntBASIC3.56□□□□□ -1.84
MRE11P49959 Y_RNA.405-201ENST00000383979 100 ntBASIC3.56□□□□□ -1.84
MRE11P49959 Y_RNA.451-201ENST00000384200 100 ntBASIC3.56□□□□□ -1.84
MRE11P49959 Y_RNA.524-201ENST00000384564 100 ntBASIC3.56□□□□□ -1.84
MRE11P49959 Y_RNA.561-201ENST00000384694 100 ntBASIC3.56□□□□□ -1.84
MRE11P49959 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.56□□□□□ -1.84
MRE11P49959 EEF1B2P7-201ENST00000451177 676 ntBASIC3.56□□□□□ -1.84
MRE11P49959 RNA5SP310-201ENST00000459084 116 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms