Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SNORD32A-201ENST00000364805 84 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RNA5SP363-201ENST00000365072 115 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RNU6-827P-201ENST00000365553 106 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RNU4-20P-201ENST00000365601 151 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RNU5A-6P-201ENST00000384136 116 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RNU6-517P-201ENST00000384362 110 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RPS29P13-201ENST00000402041 169 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 AL357139.1-201ENST00000407792 426 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RNU4-55P-201ENST00000410731 137 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 AL663109.1-201ENST00000411498 844 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.45□□□□□ -2.18
CX3CR1P49238 MTND1P29-201ENST00000448112 647 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.45□□□□□ -2.18
CX3CR1P49238 HMGN2P18-201ENST00000450680 270 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 SNRPFP3-201ENST00000457792 225 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RNU6-333P-201ENST00000459117 107 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.45□□□□□ -2.18
CX3CR1P49238 SNRPGP7-201ENST00000469016 106 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RPS3AP17-201ENST00000472594 777 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.45□□□□□ -2.18
CX3CR1P49238 AC145146.1-201ENST00000496370 254 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 HMGB1P29-201ENST00000505659 499 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.45□□□□□ -2.18
CX3CR1P49238 RPL39P5-202ENST00000512505 151 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 SNORA40.12-201ENST00000516329 111 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 SNORA31.16-201ENST00000516773 139 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 RNA5SP490-201ENST00000517141 136 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 PIGPP4-201ENST00000584447 307 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 AL034555.1-201ENST00000604816 211 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 AC116312.1-201ENST00000606841 314 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CX3CR1P49238 MIR8081-201ENST00000611533 95 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 uc_338.11-201ENST00000619132 160 ntBASIC1.45□□□□□ -2.18
CX3CR1P49238 MTND5P26-201ENST00000426018 1752 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 MIR424-201ENST00000362227 98 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 RNU6-43P-201ENST00000384302 107 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 MIR30A-201ENST00000385092 71 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 SNORD73A-201ENST00000386062 65 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 RNU6-780P-201ENST00000391030 104 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.44□□□□□ -2.18
CX3CR1P49238 SNAP23P1-201ENST00000433229 246 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.44□□□□□ -2.18
CX3CR1P49238 RNU7-167P-201ENST00000459160 62 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AL163973.1-201ENST00000484753 577 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.44□□□□□ -2.18
CX3CR1P49238 AC022447.4-201ENST00000504053 364 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.44□□□□□ -2.18
CX3CR1P49238 RNU6-405P-201ENST00000516637 110 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 RNU6-250P-201ENST00000516958 103 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.44□□□□□ -2.18
CX3CR1P49238 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.44□□□□□ -2.18
CX3CR1P49238 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.44□□□□□ -2.18
CX3CR1P49238 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AC087683.1-201ENST00000591187 441 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AC107304.1-201ENST00000604229 296 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AC017083.3-201ENST00000609955 700 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AC013412.1-201ENST00000610687 192 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 RMST_6.1-201ENST00000611980 203 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 MIR6845-201ENST00000613182 61 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.44□□□□□ -2.18
CX3CR1P49238 SNORD98-201ENST00000636377 67 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 AL450472.1-202ENST00000637286 180 ntBASIC1.44□□□□□ -2.18
CX3CR1P49238 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 Y_RNA.167-201ENST00000363735 109 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 Y_RNA.255-201ENST00000364581 97 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 RNU4-75P-201ENST00000364621 146 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 Y_RNA.296-201ENST00000364930 108 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 RNU6-439P-201ENST00000384188 106 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 Y_RNA.480-201ENST00000384364 102 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 U8.13-201ENST00000390842 128 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 CALM2P3-201ENST00000400429 449 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 RN7SKP101-201ENST00000411376 320 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.43□□□□□ -2.18
CX3CR1P49238 AC010975.2-201ENST00000427781 588 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.43□□□□□ -2.18
CX3CR1P49238 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.43□□□□□ -2.18
CX3CR1P49238 MTND2P22-201ENST00000444325 1033 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 AL031274.1-201ENST00000450334 232 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 MTCO2P18-201ENST00000457151 658 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 FAM206BP-201ENST00000510179 541 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.43□□□□□ -2.18
CX3CR1P49238 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.43□□□□□ -2.18
CX3CR1P49238 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.43□□□□□ -2.18
CX3CR1P49238 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.43□□□□□ -2.18
CX3CR1P49238 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.43□□□□□ -2.18
CX3CR1P49238 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.43□□□□□ -2.18
CX3CR1P49238 MIR502-201ENST00000606349 86 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 AP001330.5-201ENST00000607176 411 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.43□□□□□ -2.18
CX3CR1P49238 AC068944.2-201ENST00000610373 403 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 uc_338.34-201ENST00000617467 174 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 AC139792.3-201ENST00000623525 224 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.43□□□□□ -2.18
CX3CR1P49238 MTND4P23-201ENST00000447723 1363 ntBASIC1.43□□□□□ -2.18
CX3CR1P49238 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CX3CR1P49238 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CX3CR1P49238 AC245060.5-201ENST00000610778 3293 ntBASIC1.42□□□□□ -2.18
CX3CR1P49238 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CX3CR1P49238 LINC02555-201ENST00000563933 1951 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms