Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AL606662.1-201ENST00000445763 553 ntBASIC0.14□□□□□ -2.39
CKS2P33552 Z73417.1-201ENST00000447373 778 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.14□□□□□ -2.39
CKS2P33552 C1DP4-201ENST00000455429 424 ntBASIC0.14□□□□□ -2.39
CKS2P33552 RNU7-90P-201ENST00000459216 62 ntBASIC0.14□□□□□ -2.39
CKS2P33552 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.14□□□□□ -2.39
CKS2P33552 AC113347.3-201ENST00000509113 148 ntBASIC0.14□□□□□ -2.39
CKS2P33552 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
CKS2P33552 RNU6-334P-201ENST00000517072 102 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.14□□□□□ -2.39
CKS2P33552 MIR548AC-201ENST00000585049 88 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AC008752.3-201ENST00000588113 712 ntBASIC0.14□□□□□ -2.39
CKS2P33552 DEFB131E-202ENST00000602581 683 ntBASIC0.14□□□□□ -2.39
CKS2P33552 Z83818.1-201ENST00000603584 150 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AL360219.1-201ENST00000610230 366 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AC243829.6-201ENST00000612652 106 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AC136475.10-201ENST00000620253 385 ntBASIC0.14□□□□□ -2.39
CKS2P33552 AC097372.5-201ENST00000623665 376 ntBASIC0.14□□□□□ -2.39
CKS2P33552 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.14□□□□□ -2.39
CKS2P33552 AC103706.2-201ENST00000638080 240 ntBASIC0.14□□□□□ -2.39
CKS2P33552 MIRLET7D-201ENST00000362263 87 ntBASIC0.13□□□□□ -2.39
CKS2P33552 RNU1-93P-201ENST00000364704 169 ntBASIC0.13□□□□□ -2.39
CKS2P33552 RNU6-621P-201ENST00000364752 109 ntBASIC0.13□□□□□ -2.39
CKS2P33552 RNU6-1235P-201ENST00000384559 107 ntBASIC0.13□□□□□ -2.39
CKS2P33552 RNU6-1179P-201ENST00000384667 107 ntBASIC0.13□□□□□ -2.39
CKS2P33552 MIR578-201ENST00000384828 96 ntBASIC0.13□□□□□ -2.39
CKS2P33552 SNORA40.2-201ENST00000390847 128 ntBASIC0.13□□□□□ -2.39
CKS2P33552 SNORA75.2-201ENST00000391138 150 ntBASIC0.13□□□□□ -2.39
CKS2P33552 SNORA75.3-201ENST00000391231 150 ntBASIC0.13□□□□□ -2.39
CKS2P33552 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.13□□□□□ -2.39
CKS2P33552 AP000275.1-201ENST00000411943 390 ntBASIC0.13□□□□□ -2.39
CKS2P33552 AL031779.1-201ENST00000415663 330 ntBASIC0.13□□□□□ -2.39
CKS2P33552 HIGD1AP15-201ENST00000416198 280 ntBASIC0.13□□□□□ -2.39
CKS2P33552 DAP3P1-201ENST00000441522 278 ntBASIC0.13□□□□□ -2.39
CKS2P33552 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.13□□□□□ -2.39
CKS2P33552 AL031313.1-201ENST00000448435 256 ntBASIC0.13□□□□□ -2.39
CKS2P33552 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.13□□□□□ -2.39
CKS2P33552 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.13□□□□□ -2.39
CKS2P33552 SNRPFP3-201ENST00000457792 225 ntBASIC0.13□□□□□ -2.39
CKS2P33552 RNU6-498P-201ENST00000459468 107 ntBASIC0.13□□□□□ -2.39
CKS2P33552 RNU5F-4P-201ENST00000516581 114 ntBASIC0.13□□□□□ -2.39
CKS2P33552 RNA5SP102-201ENST00000516865 106 ntBASIC0.13□□□□□ -2.39
CKS2P33552 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.13□□□□□ -2.39
CKS2P33552 FAM106DP-201ENST00000586416 501 ntBASIC0.13□□□□□ -2.39
CKS2P33552 AC064872.1-201ENST00000604823 1072 ntBASIC0.13□□□□□ -2.39
CKS2P33552 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.13□□□□□ -2.39
CKS2P33552 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.13□□□□□ -2.39
CKS2P33552 AC026585.1-201ENST00000619582 524 ntBASIC0.13□□□□□ -2.39
CKS2P33552 FRG1KP-201ENST00000623592 341 ntBASIC0.13□□□□□ -2.39
CKS2P33552 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.13□□□□□ -2.39
CKS2P33552 CASC19-280ENST00000642102 1351 ntBASIC0.13□□□□□ -2.39
CKS2P33552 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
CKS2P33552 RNU1-76P-201ENST00000362903 159 ntBASIC0.12□□□□□ -2.39
CKS2P33552 RNU6-960P-201ENST00000364056 120 ntBASIC0.12□□□□□ -2.39
CKS2P33552 RNY3P13-201ENST00000365542 102 ntBASIC0.12□□□□□ -2.39
CKS2P33552 RNA5SP109-201ENST00000391010 116 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.12□□□□□ -2.39
CKS2P33552 AC010154.1-201ENST00000425857 269 ntBASIC0.12□□□□□ -2.39
CKS2P33552 RPL23AP30-201ENST00000432419 501 ntBASIC0.12□□□□□ -2.39
CKS2P33552 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.12□□□□□ -2.39
CKS2P33552 AC007547.1-201ENST00000462177 490 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AL049830.1-201ENST00000468034 425 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AP000797.1-201ENST00000478870 387 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AL163973.1-201ENST00000484753 577 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AC108740.1-201ENST00000498629 225 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AC067942.3-201ENST00000512025 362 ntBASIC0.12□□□□□ -2.39
CKS2P33552 RNU1-86P-201ENST00000516108 154 ntBASIC0.12□□□□□ -2.39
CKS2P33552 SNORA31.10-201ENST00000516482 106 ntBASIC0.12□□□□□ -2.39
CKS2P33552 RNU1-107P-201ENST00000516617 154 ntBASIC0.12□□□□□ -2.39
CKS2P33552 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.12□□□□□ -2.39
CKS2P33552 AC022784.5-201ENST00000522241 437 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.12□□□□□ -2.39
CKS2P33552 AL390123.1-201ENST00000603216 237 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.12□□□□□ -2.39
CKS2P33552 AC243829.3-201ENST00000622177 108 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AC106754.2-201ENST00000623006 233 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AC006927.4-201ENST00000639187 543 ntBASIC0.12□□□□□ -2.39
CKS2P33552 AC006927.2-201ENST00000639256 389 ntBASIC0.12□□□□□ -2.39
CKS2P33552 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CKS2P33552 SNORD116-13-201ENST00000384408 92 ntBASIC0.11□□□□□ -2.39
CKS2P33552 RSL24D1P8-201ENST00000434442 492 ntBASIC0.11□□□□□ -2.39
CKS2P33552 AL606517.2-201ENST00000442855 241 ntBASIC0.11□□□□□ -2.39
CKS2P33552 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.11□□□□□ -2.39
CKS2P33552 SRRM1P2-201ENST00000464531 1192 ntBASIC0.11□□□□□ -2.39
CKS2P33552 AL049829.1-201ENST00000465411 156 ntBASIC0.11□□□□□ -2.39
CKS2P33552 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.11□□□□□ -2.39
CKS2P33552 AC022493.2-201ENST00000506122 481 ntBASIC0.11□□□□□ -2.39
CKS2P33552 AC109445.1-201ENST00000512356 383 ntBASIC0.11□□□□□ -2.39
CKS2P33552 MTND2P7-201ENST00000521337 640 ntBASIC0.11□□□□□ -2.39
CKS2P33552 AC087883.1-201ENST00000551882 391 ntBASIC0.11□□□□□ -2.39
CKS2P33552 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.11□□□□□ -2.39
CKS2P33552 AL512605.2-201ENST00000592972 256 ntBASIC0.11□□□□□ -2.39
CKS2P33552 AL606834.3-201ENST00000602615 496 ntBASIC0.11□□□□□ -2.39
CKS2P33552 AC092354.1-201ENST00000606057 376 ntBASIC0.11□□□□□ -2.39
CKS2P33552 BX322639.1-202ENST00000423987 2213 ntBASIC0.11□□□□□ -2.39
CKS2P33552 MTND5P16-201ENST00000460269 1703 ntBASIC0.1□□□□□ -2.39
CKS2P33552 MTND4P5-201ENST00000435821 1374 ntBASIC0.1□□□□□ -2.39
CKS2P33552 U3.9-201ENST00000363823 204 ntBASIC0.1□□□□□ -2.39
CKS2P33552 RNU6-418P-201ENST00000384035 107 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms