Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.58□□□□□ -2.32
HOXA6P31267 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HOXA6P31267 RNU6-560P-201ENST00000364007 108 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 SNORD32B-201ENST00000364460 84 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 SNORA75B-201ENST00000384053 137 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 RN7SKP200-201ENST00000410564 320 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.57□□□□□ -2.32
HOXA6P31267 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.57□□□□□ -2.32
HOXA6P31267 MTND4P20-201ENST00000424125 869 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.57□□□□□ -2.32
HOXA6P31267 RNU7-34P-201ENST00000459394 64 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.57□□□□□ -2.32
HOXA6P31267 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.57□□□□□ -2.32
HOXA6P31267 AP003049.1-201ENST00000529418 457 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
HOXA6P31267 AL355816.2-201ENST00000610049 647 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 AC245297.2-201ENST00000610119 565 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 AC104465.1-201ENST00000611365 139 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 AL158163.2-201ENST00000619110 700 ntBASIC0.57□□□□□ -2.32
HOXA6P31267 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.57□□□□□ -2.32
HOXA6P31267 RNU6-462P-201ENST00000362659 105 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 RNU4-79P-201ENST00000362764 141 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 SMIM11P1-201ENST00000369586 178 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 Y_RNA.433-201ENST00000384089 102 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 RNU6-910P-201ENST00000390844 107 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
HOXA6P31267 MIR942-201ENST00000401111 86 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 RNU2-62P-201ENST00000410868 191 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 AC098934.3-201ENST00000430450 190 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.56□□□□□ -2.32
HOXA6P31267 SNORD124-201ENST00000459577 104 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.56□□□□□ -2.32
HOXA6P31267 Y_RNA.687-201ENST00000516558 91 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
HOXA6P31267 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.56□□□□□ -2.32
HOXA6P31267 MTATP6P2-201ENST00000603319 678 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 AC018889.1-201ENST00000605372 397 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
HOXA6P31267 AL356776.1-201ENST00000406574 447 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 AC092809.3-201ENST00000415453 231 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 VPS26BP1-201ENST00000417155 755 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 RPS26P5-201ENST00000418544 335 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.55□□□□□ -2.32
HOXA6P31267 BET1P1-201ENST00000482276 359 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 RNA5SP168-201ENST00000516642 112 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 LRRC6P1-201ENST00000532188 885 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.55□□□□□ -2.32
HOXA6P31267 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.55□□□□□ -2.32
HOXA6P31267 VN1R82P-201ENST00000601481 356 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 AL596327.1-201ENST00000603629 213 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 AL022154.1-201ENST00000604698 785 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 AL451064.1-201ENST00000607718 471 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 AC091948.2-201ENST00000636510 279 ntBASIC0.55□□□□□ -2.32
HOXA6P31267 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
HOXA6P31267 AL391994.1-201ENST00000254724 282 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 Y_RNA.178-201ENST00000363832 102 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 RNU4-56P-201ENST00000364700 142 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
HOXA6P31267 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.54□□□□□ -2.32
HOXA6P31267 AL591043.1-201ENST00000432461 424 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AL117351.1-201ENST00000438864 766 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 MTND1P30-201ENST00000441241 901 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 BTBD7P2-201ENST00000441962 620 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.54□□□□□ -2.32
HOXA6P31267 AC022447.4-201ENST00000504053 364 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC119751.4-201ENST00000507498 357 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC079395.1-201ENST00000510981 262 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC074344.1-201ENST00000512823 224 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 SNORA31.2-201ENST00000516019 134 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC092451.2-201ENST00000538746 658 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC009712.1-201ENST00000564938 316 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 MTND3P13-201ENST00000574391 343 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 SNORA59B-202ENST00000578183 701 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC008507.2-201ENST00000588402 1176 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 HMGN1P30-201ENST00000589286 268 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC105129.3-201ENST00000605455 485 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AC024060.1-201ENST00000607052 494 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 AL512506.1-201ENST00000613918 449 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
HOXA6P31267 RNU6-716P-201ENST00000365621 103 ntBASIC0.53□□□□□ -2.32
HOXA6P31267 SNORA32.2-201ENST00000384049 122 ntBASIC0.53□□□□□ -2.32
HOXA6P31267 RNU6-1245P-201ENST00000411130 106 ntBASIC0.53□□□□□ -2.32
HOXA6P31267 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
HOXA6P31267 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXA6P31267 AC109445.1-201ENST00000512356 383 ntBASIC0.53□□□□□ -2.32
HOXA6P31267 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXA6P31267 AC091489.2-201ENST00000566263 604 ntBASIC0.53□□□□□ -2.32
HOXA6P31267 Z83818.1-201ENST00000603584 150 ntBASIC0.53□□□□□ -2.32
HOXA6P31267 AL034555.1-201ENST00000604816 211 ntBASIC0.53□□□□□ -2.32
HOXA6P31267 AC243829.6-201ENST00000612652 106 ntBASIC0.53□□□□□ -2.32
HOXA6P31267 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.53□□□□□ -2.32
HOXA6P31267 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.53□□□□□ -2.32
HOXA6P31267 RNU6-222P-201ENST00000362438 107 ntBASIC0.52□□□□□ -2.33
HOXA6P31267 VTRNA1-3-201ENST00000365645 89 ntBASIC0.52□□□□□ -2.33
HOXA6P31267 RNA5SP511-201ENST00000410487 115 ntBASIC0.52□□□□□ -2.33
HOXA6P31267 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.52□□□□□ -2.33
HOXA6P31267 AC114482.1-201ENST00000418010 247 ntBASIC0.52□□□□□ -2.33
HOXA6P31267 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms