Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RNU6-254P-201ENST00000363377 107 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RNY4P14-201ENST00000363656 96 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RNA5SP126-201ENST00000365092 109 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 Y_RNA.450-201ENST00000384198 113 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RNU6-301P-201ENST00000384277 107 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RNU6-332P-201ENST00000391193 108 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 AL023284.1-201ENST00000403956 276 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 AL355497.1-201ENST00000406262 551 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RNA5SP201-201ENST00000410316 124 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RNA5SP425-201ENST00000410336 112 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RN7SKP223-201ENST00000410582 62 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 HMGN2P26-201ENST00000463169 339 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 AC104564.1-201ENST00000493028 407 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 ANXA2P1-201ENST00000505539 926 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.17□□□□□ -2.06
ERCC2P18074 SCOCP1-201ENST00000554676 349 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.17□□□□□ -2.06
ERCC2P18074 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.17□□□□□ -2.06
ERCC2P18074 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.17□□□□□ -2.06
ERCC2P18074 Z98751.3-201ENST00000604447 521 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 RMST_3.1-201ENST00000611651 109 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
ERCC2P18074 AL359314.1-201ENST00000616913 261 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 U4.5-201ENST00000617137 123 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 AC024614.3-201ENST00000637860 256 ntBASIC2.17□□□□□ -2.06
ERCC2P18074 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ERCC2P18074 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ERCC2P18074 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 MIR548F1-201ENST00000408667 84 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 RN7SKP32-201ENST00000410167 303 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.16□□□□□ -2.06
ERCC2P18074 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.16□□□□□ -2.06
ERCC2P18074 NDUFA5P4-201ENST00000436704 385 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 U8.21-201ENST00000459536 136 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 AC093259.1-201ENST00000509755 300 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 RNU6-991P-201ENST00000516168 107 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 AC021231.3-201ENST00000558497 370 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 AC109446.1-201ENST00000566172 220 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 AC100830.2-201ENST00000581636 240 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.16□□□□□ -2.06
ERCC2P18074 AC068790.6-201ENST00000602558 258 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 AC005858.4-201ENST00000623191 700 ntBASIC2.16□□□□□ -2.06
ERCC2P18074 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ERCC2P18074 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
ERCC2P18074 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ERCC2P18074 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
ERCC2P18074 RNU6-1159P-201ENST00000362933 107 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 RNU6-1252P-201ENST00000363054 104 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 SNORD14D-201ENST00000384390 87 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 SNORA64-201ENST00000384674 134 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 SNORA40.19-201ENST00000390846 128 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 RNU6-325P-201ENST00000411132 105 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 SRIP3-201ENST00000413200 219 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 UBE2V1P4-201ENST00000425374 344 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 AL139415.2-201ENST00000431968 163 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.15□□□□□ -2.07
ERCC2P18074 AC096638.1-201ENST00000444678 216 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 AL353705.4-201ENST00000449661 238 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.15□□□□□ -2.07
ERCC2P18074 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.15□□□□□ -2.07
ERCC2P18074 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.15□□□□□ -2.07
ERCC2P18074 AC026371.1-201ENST00000551867 419 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 AC091544.4-201ENST00000555268 342 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.15□□□□□ -2.07
ERCC2P18074 AP000654.2-201ENST00000605633 586 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 PCGEM1.1-201ENST00000613431 131 ntBASIC2.15□□□□□ -2.07
ERCC2P18074 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
ERCC2P18074 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ERCC2P18074 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ERCC2P18074 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ERCC2P18074 RNU6-26P-201ENST00000383985 107 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 RNU6-378P-201ENST00000384324 107 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 SNORA67.3-201ENST00000384366 140 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 SNORD115-47-201ENST00000391226 86 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ERCC2P18074 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 AL030996.1-201ENST00000411430 235 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 DPH3P2-201ENST00000422618 250 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.14□□□□□ -2.07
ERCC2P18074 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ERCC2P18074 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.14□□□□□ -2.07
ERCC2P18074 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.14□□□□□ -2.07
ERCC2P18074 AC245102.2-201ENST00000448956 180 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.14□□□□□ -2.07
ERCC2P18074 AC021146.2-201ENST00000504736 556 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 RNU6-567P-201ENST00000516746 107 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.14□□□□□ -2.07
ERCC2P18074 CYP4A27P-201ENST00000567218 190 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 AC073869.6-201ENST00000640656 341 ntBASIC2.14□□□□□ -2.07
ERCC2P18074 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
ERCC2P18074 Y_RNA.6-201ENST00000362350 114 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 Y_RNA.89-201ENST00000363031 102 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 SNORD113-7-201ENST00000363762 77 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 U3.9-201ENST00000363823 204 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.13□□□□□ -2.07
ERCC2P18074 SNRPEP10-201ENST00000420249 274 ntBASIC2.13□□□□□ -2.07
ERCC2P18074 AC012306.1-201ENST00000423267 114 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms