| MUC1 | P15941 | AC011494.1-201 | ENST00000596454 | 237 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC107304.1-201 | ENST00000604229 | 296 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC1 | P15941 | C8orf59-212 | ENST00000615697 | 483 nt | APPRIS P1 TSL 2 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC1 | P15941 | MIR5739-201 | ENST00000619803 | 80 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC109471.3-201 | ENST00000625219 | 233 nt | TSL 5 BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC241585.2-209 | ENST00000638217 | 143 nt | BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC1 | P15941 | SLITRK6-201 | ENST00000400286 | 4318 nt | APPRIS P1 TSL 1 (best) BASIC | 1.48 | □□□□□ -2.17 | | |
| MUC1 | P15941 | GABRA2-209 | ENST00000510861 | 3411 nt | APPRIS P1 TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | RNU6-655P-201 | ENST00000362858 | 107 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | RNU1-23P-201 | ENST00000363361 | 144 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | RNY3P3-201 | ENST00000363816 | 102 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | Y_RNA.231-201 | ENST00000364358 | 102 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | MIR95-201 | ENST00000385072 | 81 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | MIR548F1-201 | ENST00000408667 | 84 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | Y_RNA.615-201 | ENST00000410769 | 117 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | RN7SKP51-201 | ENST00000410781 | 304 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AL592435.1-201 | ENST00000416401 | 469 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AL137856.1-202 | ENST00000418238 | 422 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | LINC01509-202 | ENST00000423523 | 408 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | LINC00459-201 | ENST00000431656 | 376 nt | TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | LINC02336-201 | ENST00000434117 | 330 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AL122017.1-201 | ENST00000435858 | 784 nt | TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC003989.2-201 | ENST00000440224 | 169 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AL161788.1-201 | ENST00000441805 | 169 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AL592309.2-201 | ENST00000444647 | 607 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC007677.1-201 | ENST00000445757 | 515 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AL353752.1-201 | ENST00000454946 | 260 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | snoU13.14-201 | ENST00000459372 | 104 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | RNU7-138P-201 | ENST00000459479 | 64 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | LINC02046-202 | ENST00000481334 | 390 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC083904.1-201 | ENST00000487828 | 231 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC099520.1-202 | ENST00000503650 | 777 nt | TSL 3 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC091885.1-201 | ENST00000506658 | 268 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC096745.1-201 | ENST00000509945 | 370 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | RPL39P5-202 | ENST00000512505 | 151 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | RNU6-970P-201 | ENST00000516312 | 107 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | SNORD60.2-201 | ENST00000516883 | 86 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | SNORA31.25-201 | ENST00000517242 | 134 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | COPS8P3-201 | ENST00000526024 | 482 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AP005597.4-201 | ENST00000526762 | 229 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC090371.2-202 | ENST00000582239 | 644 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | MIR5692C1-201 | ENST00000585309 | 91 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC004492.1-201 | ENST00000607036 | 742 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | MIR6845-201 | ENST00000613182 | 61 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | AC084768.2-201 | ENST00000622736 | 221 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | FER-210 | ENST00000628534 | 558 nt | TSL 5 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | WWP1P1-201 | ENST00000466609 | 2769 nt | BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | CUL2-206 | ENST00000421317 | 2376 nt | TSL 2 BASIC | 1.47 | □□□□□ -2.17 | | |
| MUC1 | P15941 | SAGE1-201 | ENST00000324447 | 2952 nt | APPRIS P2 TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNU6-1210P-201 | ENST00000363775 | 107 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RPS29P13-201 | ENST00000402041 | 169 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AL033519.2-201 | ENST00000403958 | 392 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC009411.1-202 | ENST00000412424 | 548 nt | TSL 4 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AL669831.2-201 | ENST00000422528 | 456 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AL645568.3-201 | ENST00000433683 | 316 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | ERLEC1P1-201 | ENST00000433806 | 578 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AL136987.2-201 | ENST00000457321 | 684 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | SNRPGP7-201 | ENST00000469016 | 106 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC027575.1-201 | ENST00000481064 | 460 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | LINC00971-201 | ENST00000482721 | 535 nt | TSL 2 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | HYDIN2-201 | ENST00000493714 | 554 nt | TSL 4 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RPS29P11-201 | ENST00000496507 | 171 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC010255.2-201 | ENST00000505209 | 428 nt | TSL 3 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC079140.5-201 | ENST00000507882 | 310 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AK3P2-201 | ENST00000507976 | 429 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC107208.1-201 | ENST00000508265 | 519 nt | TSL 4 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC116337.1-201 | ENST00000509680 | 687 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC090568.2-205 | ENST00000518631 | 576 nt | TSL 4 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNU6-323P-201 | ENST00000521915 | 107 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | MTND1P35-201 | ENST00000526739 | 508 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC090124.2-201 | ENST00000527727 | 563 nt | TSL 4 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | TRAV1-1-201 | ENST00000542354 | 392 nt | APPRIS P1 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC025423.5-201 | ENST00000550230 | 219 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AL139193.1-201 | ENST00000554967 | 539 nt | TSL 4 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | MIR4255-201 | ENST00000579351 | 72 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | BNIP3P16-201 | ENST00000589779 | 534 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC090227.2-201 | ENST00000591105 | 340 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | BNIP3P25-201 | ENST00000596023 | 559 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AL357078.3-201 | ENST00000607528 | 618 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC064836.2-201 | ENST00000609491 | 462 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RMST_3.1-201 | ENST00000611651 | 109 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | DISC2.1-201 | ENST00000612827 | 205 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC007792.1-201 | ENST00000623023 | 402 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | PTP4A2-220 | ENST00000627328 | 615 nt | TSL 5 BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC024614.3-201 | ENST00000637860 | 256 nt | BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 1.46 | □□□□□ -2.18 | | |
| MUC1 | P15941 | CFHR4-202 | ENST00000367416 | 2178 nt | APPRIS P1 TSL 2 BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | TFEC-204 | ENST00000457268 | 6309 nt | TSL 3 BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | KTN1-204 | ENST00000395311 | 4516 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | snoU2_19.1-201 | ENST00000362361 | 80 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNU6-1285P-201 | ENST00000363480 | 105 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNY4P14-201 | ENST00000363656 | 96 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | Y_RNA.256-201 | ENST00000364594 | 104 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNU4-12P-201 | ENST00000365233 | 139 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | Y_RNA.402-201 | ENST00000383972 | 102 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | Y_RNA.450-201 | ENST00000384198 | 113 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNU6-43P-201 | ENST00000384302 | 107 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNU6-1274P-201 | ENST00000384557 | 107 nt | BASIC | 1.45 | □□□□□ -2.18 | | |
| MUC1 | P15941 | RNU6-1222P-201 | ENST00000384615 | 107 nt | BASIC | 1.45 | □□□□□ -2.18 | | |