Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MTND5P9-201ENST00000503854 1755 ntBASIC2.47□□□□□ -2.01
CDH1P12830 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH1P12830 Y_RNA.112-201ENST00000363250 102 ntBASIC2.47□□□□□ -2.01
CDH1P12830 Y_RNA.123-201ENST00000363338 102 ntBASIC2.47□□□□□ -2.01
CDH1P12830 RNA5SP393-201ENST00000363423 117 ntBASIC2.47□□□□□ -2.01
CDH1P12830 RNU1-105P-201ENST00000363470 161 ntBASIC2.47□□□□□ -2.01
CDH1P12830 Y_RNA.216-201ENST00000364205 93 ntBASIC2.47□□□□□ -2.01
CDH1P12830 RNA5SP139-201ENST00000364340 117 ntBASIC2.47□□□□□ -2.01
CDH1P12830 RNU6-1180P-201ENST00000364935 107 ntBASIC2.47□□□□□ -2.01
CDH1P12830 MIR196B-201ENST00000384852 84 ntBASIC2.47□□□□□ -2.01
CDH1P12830 MIR767-201ENST00000390228 109 ntBASIC2.47□□□□□ -2.01
CDH1P12830 BTF3L4P2-201ENST00000392798 346 ntBASIC2.47□□□□□ -2.01
CDH1P12830 RNA5SP390-201ENST00000410191 113 ntBASIC2.47□□□□□ -2.01
CDH1P12830 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH1P12830 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH1P12830 NUP35P1-201ENST00000422734 947 ntBASIC2.47□□□□□ -2.01
CDH1P12830 PMCHL1-202ENST00000423102 261 ntBASIC2.47□□□□□ -2.01
CDH1P12830 RPL23AP95-201ENST00000426806 265 ntBASIC2.47□□□□□ -2.01
CDH1P12830 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
CDH1P12830 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH1P12830 AL109933.2-201ENST00000452651 260 ntBASIC2.47□□□□□ -2.01
CDH1P12830 AL049873.1-201ENST00000480540 376 ntBASIC2.47□□□□□ -2.01
CDH1P12830 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH1P12830 SMURF2P1-201ENST00000514992 481 ntBASIC2.47□□□□□ -2.01
CDH1P12830 RNU6-976P-201ENST00000516086 111 ntBASIC2.47□□□□□ -2.01
CDH1P12830 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH1P12830 AL442663.2-201ENST00000554385 511 ntBASIC2.47□□□□□ -2.01
CDH1P12830 AC090897.2-201ENST00000581715 130 ntBASIC2.47□□□□□ -2.01
CDH1P12830 AC022432.1-201ENST00000595739 310 ntBASIC2.47□□□□□ -2.01
CDH1P12830 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH1P12830 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
CDH1P12830 HMGB1P24-202ENST00000615653 685 ntBASIC2.47□□□□□ -2.01
CDH1P12830 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH1P12830 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH1P12830 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.47□□□□□ -2.01
CDH1P12830 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.46□□□□□ -2.02
CDH1P12830 MIR544A-201ENST00000384855 91 ntBASIC2.46□□□□□ -2.02
CDH1P12830 RNU6-1140P-201ENST00000410517 106 ntBASIC2.46□□□□□ -2.02
CDH1P12830 RNU6-1245P-201ENST00000411130 106 ntBASIC2.46□□□□□ -2.02
CDH1P12830 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH1P12830 AC018865.2-201ENST00000423631 129 ntBASIC2.46□□□□□ -2.02
CDH1P12830 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH1P12830 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH1P12830 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDH1P12830 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.46□□□□□ -2.02
CDH1P12830 AC107626.1-201ENST00000471084 183 ntBASIC2.46□□□□□ -2.02
CDH1P12830 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.46□□□□□ -2.02
CDH1P12830 SCARNA15.1-201ENST00000516384 125 ntBASIC2.46□□□□□ -2.02
CDH1P12830 Y_RNA.711-201ENST00000516993 102 ntBASIC2.46□□□□□ -2.02
CDH1P12830 AP000889.1-201ENST00000530968 660 ntBASIC2.46□□□□□ -2.02
CDH1P12830 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH1P12830 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.46□□□□□ -2.02
CDH1P12830 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDH1P12830 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDH1P12830 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDH1P12830 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
CDH1P12830 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH1P12830 AC026241.1-201ENST00000517873 2142 ntBASIC2.45□□□□□ -2.02
CDH1P12830 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CDH1P12830 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH1P12830 ZNF299P-201ENST00000406845 1804 ntBASIC2.45□□□□□ -2.02
CDH1P12830 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH1P12830 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH1P12830 RNU6-490P-201ENST00000362985 107 ntBASIC2.45□□□□□ -2.02
CDH1P12830 SNORA63-201ENST00000363450 132 ntBASIC2.45□□□□□ -2.02
CDH1P12830 Y_RNA.496-201ENST00000384444 101 ntBASIC2.45□□□□□ -2.02
CDH1P12830 RNU6-308P-201ENST00000390957 107 ntBASIC2.45□□□□□ -2.02
CDH1P12830 AL133475.1-201ENST00000404414 305 ntBASIC2.45□□□□□ -2.02
CDH1P12830 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH1P12830 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.45□□□□□ -2.02
CDH1P12830 AL353997.1-201ENST00000432936 108 ntBASIC2.45□□□□□ -2.02
CDH1P12830 RPL23AP50-201ENST00000434149 455 ntBASIC2.45□□□□□ -2.02
CDH1P12830 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.45□□□□□ -2.02
CDH1P12830 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.45□□□□□ -2.02
CDH1P12830 AL163540.1-201ENST00000485382 386 ntBASIC2.45□□□□□ -2.02
CDH1P12830 AC068781.1-201ENST00000488231 618 ntBASIC2.45□□□□□ -2.02
CDH1P12830 AC090096.1-201ENST00000489168 390 ntBASIC2.45□□□□□ -2.02
CDH1P12830 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.45□□□□□ -2.02
CDH1P12830 RNU6-699P-201ENST00000517081 110 ntBASIC2.45□□□□□ -2.02
CDH1P12830 SUB1P3-201ENST00000564581 315 ntBASIC2.45□□□□□ -2.02
CDH1P12830 MIR5701-3-201ENST00000578890 82 ntBASIC2.45□□□□□ -2.02
CDH1P12830 MIR5701-1-201ENST00000585138 82 ntBASIC2.45□□□□□ -2.02
CDH1P12830 AL355877.2-201ENST00000603670 358 ntBASIC2.45□□□□□ -2.02
CDH1P12830 AL356157.2-201ENST00000605122 111 ntBASIC2.45□□□□□ -2.02
CDH1P12830 RNU6-91P-201ENST00000607774 107 ntBASIC2.45□□□□□ -2.02
CDH1P12830 Y_RNA.812-201ENST00000610788 101 ntBASIC2.45□□□□□ -2.02
CDH1P12830 Y_RNA.784-201ENST00000613803 101 ntBASIC2.45□□□□□ -2.02
CDH1P12830 MIR5701-2-201ENST00000615634 82 ntBASIC2.45□□□□□ -2.02
CDH1P12830 Y_RNA.787-201ENST00000616522 101 ntBASIC2.45□□□□□ -2.02
CDH1P12830 Y_RNA.780-201ENST00000617336 101 ntBASIC2.45□□□□□ -2.02
CDH1P12830 Y_RNA.801-201ENST00000619005 101 ntBASIC2.45□□□□□ -2.02
CDH1P12830 AC091925.1-201ENST00000623204 462 ntBASIC2.45□□□□□ -2.02
CDH1P12830 SNORA43.4-201ENST00000629559 138 ntBASIC2.45□□□□□ -2.02
CDH1P12830 AC009541.1-201ENST00000438279 2662 ntBASIC2.45□□□□□ -2.02
CDH1P12830 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH1P12830 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDH1P12830 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDH1P12830 RNY1P16-201ENST00000363063 111 ntBASIC2.44□□□□□ -2.02
CDH1P12830 RNU6-595P-201ENST00000363944 107 ntBASIC2.44□□□□□ -2.02
CDH1P12830 Y_RNA.252-201ENST00000364556 101 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms