Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.11□□□□□ -1.75
RARAP10276 AC068700.1-201ENST00000565862 3754 ntBASIC4.11□□□□□ -1.75
RARAP10276 CUL1P1-201ENST00000509510 2425 ntBASIC4.11□□□□□ -1.75
RARAP10276 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.1□□□□□ -1.75
RARAP10276 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.1□□□□□ -1.75
RARAP10276 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RARAP10276 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RARAP10276 Y_RNA.218-201ENST00000364218 104 ntBASIC4.1□□□□□ -1.75
RARAP10276 Y_RNA.273-201ENST00000364703 102 ntBASIC4.1□□□□□ -1.75
RARAP10276 RNU4-11P-201ENST00000365287 132 ntBASIC4.1□□□□□ -1.75
RARAP10276 RPS26P8-201ENST00000393490 348 ntBASIC4.1□□□□□ -1.75
RARAP10276 CBX3P9-201ENST00000402326 552 ntBASIC4.1□□□□□ -1.75
RARAP10276 AL591419.1-201ENST00000427423 339 ntBASIC4.1□□□□□ -1.75
RARAP10276 MTND4LP9-201ENST00000427694 174 ntBASIC4.1□□□□□ -1.75
RARAP10276 RNU6-971P-201ENST00000516920 106 ntBASIC4.1□□□□□ -1.75
RARAP10276 RN7SKP289-201ENST00000517244 295 ntBASIC4.1□□□□□ -1.75
RARAP10276 RNA5SP179-201ENST00000517284 121 ntBASIC4.1□□□□□ -1.75
RARAP10276 MIR3690-201ENST00000580266 75 ntBASIC4.1□□□□□ -1.75
RARAP10276 AC013791.1-201ENST00000616619 62 ntBASIC4.1□□□□□ -1.75
RARAP10276 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RARAP10276 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RARAP10276 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
RARAP10276 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RARAP10276 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RARAP10276 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RARAP10276 SNORA31-201ENST00000362607 130 ntBASIC4.09□□□□□ -1.75
RARAP10276 Y_RNA.127-201ENST00000363386 109 ntBASIC4.09□□□□□ -1.75
RARAP10276 RNU6-103P-201ENST00000363686 107 ntBASIC4.09□□□□□ -1.75
RARAP10276 RNU6-899P-201ENST00000363947 107 ntBASIC4.09□□□□□ -1.75
RARAP10276 snoU2_19.4-201ENST00000364329 80 ntBASIC4.09□□□□□ -1.75
RARAP10276 SNORA70C-201ENST00000384538 135 ntBASIC4.09□□□□□ -1.75
RARAP10276 AL691449.1-201ENST00000426570 421 ntBASIC4.09□□□□□ -1.75
RARAP10276 AL137159.1-201ENST00000452808 512 ntBASIC4.09□□□□□ -1.75
RARAP10276 AC146507.2-201ENST00000460608 476 ntBASIC4.09□□□□□ -1.75
RARAP10276 AC114982.1-201ENST00000469402 321 ntBASIC4.09□□□□□ -1.75
RARAP10276 AC084357.1-201ENST00000473404 255 ntBASIC4.09□□□□□ -1.75
RARAP10276 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.09□□□□□ -1.75
RARAP10276 AC107027.2-201ENST00000512197 115 ntBASIC4.09□□□□□ -1.75
RARAP10276 AC023141.12-201ENST00000512399 199 ntBASIC4.09□□□□□ -1.75
RARAP10276 SNORA25.12-201ENST00000516202 82 ntBASIC4.09□□□□□ -1.75
RARAP10276 RNU6-107P-201ENST00000516643 102 ntBASIC4.09□□□□□ -1.75
RARAP10276 AC034105.4-201ENST00000568304 277 ntBASIC4.09□□□□□ -1.75
RARAP10276 MIR3923-201ENST00000579521 83 ntBASIC4.09□□□□□ -1.75
RARAP10276 AC011471.1-201ENST00000585766 187 ntBASIC4.09□□□□□ -1.75
RARAP10276 AC112484.5-201ENST00000624189 228 ntBASIC4.09□□□□□ -1.75
RARAP10276 AC244205.2-202ENST00000635781 342 ntBASIC4.09□□□□□ -1.75
RARAP10276 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RARAP10276 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.09□□□□□ -1.75
RARAP10276 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
RARAP10276 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.08□□□□□ -1.76
RARAP10276 RNU4-10P-201ENST00000364383 140 ntBASIC4.08□□□□□ -1.76
RARAP10276 AC068538.1-201ENST00000376856 336 ntBASIC4.08□□□□□ -1.76
RARAP10276 RPL21P65-201ENST00000406094 466 ntBASIC4.08□□□□□ -1.76
RARAP10276 RNA5SP317-201ENST00000410176 116 ntBASIC4.08□□□□□ -1.76
RARAP10276 RNA5SP311-201ENST00000411290 116 ntBASIC4.08□□□□□ -1.76
RARAP10276 RPL30P13-201ENST00000418873 348 ntBASIC4.08□□□□□ -1.76
RARAP10276 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RARAP10276 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.08□□□□□ -1.76
RARAP10276 RPL31P41-201ENST00000477967 372 ntBASIC4.08□□□□□ -1.76
RARAP10276 RNA5SP315-201ENST00000516340 116 ntBASIC4.08□□□□□ -1.76
RARAP10276 RNA5SP312-201ENST00000517068 116 ntBASIC4.08□□□□□ -1.76
RARAP10276 AC022616.8-201ENST00000533569 253 ntBASIC4.08□□□□□ -1.76
RARAP10276 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.08□□□□□ -1.76
RARAP10276 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.08□□□□□ -1.76
RARAP10276 AC090877.1-201ENST00000561418 344 ntBASIC4.08□□□□□ -1.76
RARAP10276 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.08□□□□□ -1.76
RARAP10276 DNAJC19P2-201ENST00000593340 302 ntBASIC4.08□□□□□ -1.76
RARAP10276 AL034555.1-201ENST00000604816 211 ntBASIC4.08□□□□□ -1.76
RARAP10276 AC110741.2-201ENST00000605278 268 ntBASIC4.08□□□□□ -1.76
RARAP10276 U7.8-201ENST00000619968 63 ntBASIC4.08□□□□□ -1.76
RARAP10276 AC010329.5-201ENST00000623497 2174 ntBASIC4.08□□□□□ -1.76
RARAP10276 MIR3199-2-201ENST00000636243 86 ntBASIC4.08□□□□□ -1.76
RARAP10276 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.08□□□□□ -1.76
RARAP10276 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RARAP10276 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RARAP10276 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.07□□□□□ -1.76
RARAP10276 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RARAP10276 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
RARAP10276 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RARAP10276 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RARAP10276 SNORD115-30-201ENST00000364117 82 ntBASIC4.07□□□□□ -1.76
RARAP10276 MIR626-201ENST00000385032 94 ntBASIC4.07□□□□□ -1.76
RARAP10276 MIR513C-201ENST00000401352 84 ntBASIC4.07□□□□□ -1.76
RARAP10276 AL161651.1-201ENST00000440882 223 ntBASIC4.07□□□□□ -1.76
RARAP10276 RPS4XP13-201ENST00000483219 789 ntBASIC4.07□□□□□ -1.76
RARAP10276 RNU6-1333P-201ENST00000516162 93 ntBASIC4.07□□□□□ -1.76
RARAP10276 HIGD1AP1-201ENST00000550979 275 ntBASIC4.07□□□□□ -1.76
RARAP10276 AL110115.1-201ENST00000614396 364 ntBASIC4.07□□□□□ -1.76
RARAP10276 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.07□□□□□ -1.76
RARAP10276 AC073308.1-201ENST00000623696 305 ntBASIC4.07□□□□□ -1.76
RARAP10276 MIR3658-201ENST00000636291 56 ntBASIC4.07□□□□□ -1.76
RARAP10276 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RARAP10276 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
RARAP10276 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RARAP10276 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RARAP10276 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.06□□□□□ -1.76
RARAP10276 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RARAP10276 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
RARAP10276 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.06□□□□□ -1.76
RARAP10276 Y_RNA.71-201ENST00000362892 104 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms