Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.19□□□□□ -2.22
UBCP0CG48 ARL5AP1-201ENST00000418991 388 ntBASIC1.19□□□□□ -2.22
UBCP0CG48 PRPS1P1-201ENST00000445305 876 ntBASIC1.19□□□□□ -2.22
UBCP0CG48 MTND1P18-201ENST00000448191 573 ntBASIC1.19□□□□□ -2.22
UBCP0CG48 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.19□□□□□ -2.22
UBCP0CG48 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.19□□□□□ -2.22
UBCP0CG48 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.19□□□□□ -2.22
UBCP0CG48 RPL30P7-201ENST00000479312 323 ntBASIC1.19□□□□□ -2.22
UBCP0CG48 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.19□□□□□ -2.22
UBCP0CG48 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.19□□□□□ -2.22
UBCP0CG48 AC106038.2-201ENST00000520706 568 ntBASIC1.19□□□□□ -2.22
UBCP0CG48 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.19□□□□□ -2.22
UBCP0CG48 CYP4A27P-201ENST00000567218 190 ntBASIC1.19□□□□□ -2.22
UBCP0CG48 AC008250.2-201ENST00000615261 205 ntBASIC1.19□□□□□ -2.22
UBCP0CG48 MIR7843-201ENST00000622274 79 ntBASIC1.19□□□□□ -2.22
UBCP0CG48 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
UBCP0CG48 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.18□□□□□ -2.22
UBCP0CG48 RNU6-862P-201ENST00000362804 105 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 RNU6-552P-201ENST00000362869 119 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 RNU1-76P-201ENST00000362903 159 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 SNORA63D-201ENST00000364359 132 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 RNU6-378P-201ENST00000384324 107 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 ISCA1P6-201ENST00000427740 390 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AL135790.2-201ENST00000437701 267 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 OR2AQ1P-201ENST00000451972 200 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 snoU13.30-201ENST00000458951 104 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 SNORD13-201ENST00000459299 104 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AC010531.2-201ENST00000465012 153 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.18□□□□□ -2.22
UBCP0CG48 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.18□□□□□ -2.22
UBCP0CG48 RNU6-1129P-201ENST00000515964 104 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 RNU2-69P-201ENST00000516061 100 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 SNORA25.17-201ENST00000517184 124 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.18□□□□□ -2.22
UBCP0CG48 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.18□□□□□ -2.22
UBCP0CG48 AC021231.3-201ENST00000558497 370 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.18□□□□□ -2.22
UBCP0CG48 AC109446.2-201ENST00000567872 497 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 BNIP3P39-201ENST00000601077 554 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 Z98751.3-201ENST00000604447 521 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AC006566.1-201ENST00000608943 513 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AC005520.5-201ENST00000613926 164 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
UBCP0CG48 AL078604.3-201ENST00000615580 211 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AC136475.10-201ENST00000620253 385 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AC095038.3-201ENST00000634439 195 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 AL450472.1-202ENST00000637286 180 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 ZNF72P-201ENST00000425869 1908 ntBASIC1.18□□□□□ -2.22
UBCP0CG48 RNU6-1026P-201ENST00000384465 108 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 MIR1-2-201ENST00000384961 85 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 MIR548B-201ENST00000385247 97 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 RNU6-174P-201ENST00000410406 106 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 RNU6-195P-201ENST00000411352 109 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 AL161935.2-201ENST00000414627 60 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 CYCSP49-201ENST00000420810 319 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.17□□□□□ -2.22
UBCP0CG48 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.17□□□□□ -2.22
UBCP0CG48 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.17□□□□□ -2.22
UBCP0CG48 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.17□□□□□ -2.22
UBCP0CG48 AL031274.1-201ENST00000450334 232 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 AL513124.1-201ENST00000450410 614 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
UBCP0CG48 RPS29P15-201ENST00000458329 171 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 GMFBP1-201ENST00000467831 427 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.17□□□□□ -2.22
UBCP0CG48 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.17□□□□□ -2.22
UBCP0CG48 AK3P2-201ENST00000507976 429 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.17□□□□□ -2.22
UBCP0CG48 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.17□□□□□ -2.22
UBCP0CG48 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 AP000873.5-201ENST00000533906 236 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 RAB11AP2-201ENST00000545905 639 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 MIR4703-201ENST00000577728 79 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 MIR98-201ENST00000606724 119 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 AC009994.1-201ENST00000606889 253 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 AP001506.1-201ENST00000615444 211 ntBASIC1.17□□□□□ -2.22
UBCP0CG48 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
UBCP0CG48 RNU4-48P-201ENST00000365559 182 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 SNORD70.1-201ENST00000391007 85 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 HMGN1P14-201ENST00000412459 517 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.16□□□□□ -2.22
UBCP0CG48 MTCO3P29-201ENST00000432119 779 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.16□□□□□ -2.22
UBCP0CG48 AC069257.2-201ENST00000441819 155 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 snoU13.15-201ENST00000459407 104 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 HMGN2P9-201ENST00000476875 229 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AC008628.2-201ENST00000502605 298 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.16□□□□□ -2.22
UBCP0CG48 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.16□□□□□ -2.22
UBCP0CG48 AC084364.2-201ENST00000546924 395 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 MTCO3P23-201ENST00000561363 289 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AC015688.6-201ENST00000577737 104 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AP005136.1-201ENST00000579765 429 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 MIR3937-201ENST00000580135 106 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 RSL24D1P11-201ENST00000591045 491 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AP003465.2-201ENST00000602571 373 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AC011458.1-201ENST00000604034 617 ntBASIC1.16□□□□□ -2.22
UBCP0CG48 AL645939.4-201ENST00000604495 135 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms