Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 RNU1-107P-201ENST00000516617 154 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 SUMO2P16-201ENST00000519475 264 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AC011979.2-201ENST00000527568 352 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 APOOP3-201ENST00000536787 586 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AC018659.1-201ENST00000551083 169 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AC087883.1-201ENST00000551882 391 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 CYP4A27P-201ENST00000567218 190 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 MIR5697-201ENST00000578045 78 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.34□□□□□ -2.36
CXCL1P09341 DEFB131E-202ENST00000602581 683 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 MIR338-201ENST00000636369 67 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 AC006927.4-201ENST00000639187 543 ntBASIC0.34□□□□□ -2.36
CXCL1P09341 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
CXCL1P09341 AL442644.1-201ENST00000454390 3105 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
CXCL1P09341 RNU6-527P-201ENST00000363425 104 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 U3.9-201ENST00000363823 204 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 RNU4-56P-201ENST00000364700 142 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 Y_RNA.363-201ENST00000365529 113 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 RNU6-1245P-201ENST00000411130 106 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 RNA5SP111-201ENST00000411386 101 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 AC011233.1-201ENST00000422812 283 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.33□□□□□ -2.36
CXCL1P09341 HMGN1P12-201ENST00000499125 195 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 AF131216.2-201ENST00000512316 564 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 TRMT112P2-201ENST00000512910 132 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 RNU2-34P-201ENST00000516534 121 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 RNU5F-4P-201ENST00000516581 114 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 RNA5SP384-201ENST00000516615 116 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.33□□□□□ -2.36
CXCL1P09341 ADI1P3-201ENST00000549509 470 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 AC091489.2-201ENST00000566263 604 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 MIR3923-201ENST00000579521 83 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 PCGEM1.1-201ENST00000613431 131 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 AL512427.1-201ENST00000618593 349 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 SNORD3E-202ENST00000627253 216 ntBASIC0.33□□□□□ -2.36
CXCL1P09341 RNU6-105P-201ENST00000363909 104 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 RNU6-371P-201ENST00000364283 108 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 SNORA26.3-201ENST00000391119 136 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 Y_RNA.595-201ENST00000410403 105 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.32□□□□□ -2.36
CXCL1P09341 CETN4P-201ENST00000432407 469 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 AC243964.1-201ENST00000441814 261 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 AL358794.1-201ENST00000445689 381 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 Z73417.1-201ENST00000447373 778 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 AC105758.1-201ENST00000506038 399 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.32□□□□□ -2.36
CXCL1P09341 CYP3A137P-201ENST00000562436 69 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 MTND4LP25-201ENST00000570218 163 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 SNORA59B-202ENST00000578183 701 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 AC108747.1-201ENST00000609508 535 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 GHRLOS.1-201ENST00000610995 70 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 AL512506.1-201ENST00000613918 449 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 AL445523.1-201ENST00000451184 1362 ntBASIC0.32□□□□□ -2.36
CXCL1P09341 ELL2P3-201ENST00000457883 1602 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 Y_RNA.46-201ENST00000362695 102 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 Y_RNA.132-201ENST00000363421 102 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 RNU6-723P-201ENST00000383973 107 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 RNU6-413P-201ENST00000384115 107 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 RPS20P2-201ENST00000402520 389 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
CXCL1P09341 AC114737.2-201ENST00000421583 173 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.31□□□□□ -2.36
CXCL1P09341 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC078809.1-201ENST00000427601 140 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.31□□□□□ -2.36
CXCL1P09341 AC092628.1-201ENST00000436250 252 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC244670.1-201ENST00000436879 112 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.31□□□□□ -2.36
CXCL1P09341 GAPDHP17-201ENST00000449858 1001 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AL162395.1-201ENST00000457882 422 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC092991.1-201ENST00000477176 376 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 RPS26P48-201ENST00000491713 339 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC005840.1-201ENST00000498412 377 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.31□□□□□ -2.36
CXCL1P09341 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.31□□□□□ -2.36
CXCL1P09341 AP002453.2-201ENST00000533503 320 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 HSPE1P4-201ENST00000550617 308 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 EIF4A1P12-201ENST00000551910 141 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 MIR5695-201ENST00000579717 85 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC064872.1-201ENST00000604823 1072 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AP002360.4-201ENST00000606980 481 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC012409.4-201ENST00000612923 249 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC009509.4-201ENST00000619202 509 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC006386.1-201ENST00000619436 415 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC005858.4-201ENST00000623191 700 ntBASIC0.31□□□□□ -2.36
CXCL1P09341 AC073343.1-201ENST00000328239 651 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CXCL1P09341 RNU6-43P-201ENST00000384302 107 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 RNU6-1026P-201ENST00000384465 108 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 RNU6-321P-201ENST00000410912 106 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AL590135.1-201ENST00000422215 156 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.3□□□□□ -2.36
CXCL1P09341 AC019205.3-201ENST00000424573 156 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AC002486.1-201ENST00000435098 391 ntBASIC0.3□□□□□ -2.36
CXCL1P09341 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.3□□□□□ -2.36
CXCL1P09341 AC073614.1-201ENST00000438690 650 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms