Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HOXC4P09017 AC138393.1-203ENST00000327086 343 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 SNORA3A-201ENST00000364113 130 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 RNA5SP125-201ENST00000364843 120 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 Y_RNA.474-201ENST00000384341 102 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 RNU6-434P-201ENST00000384376 107 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 Y_RNA.530-201ENST00000384587 101 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 MIR583-201ENST00000384846 75 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 CYCSP33-201ENST00000414485 327 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 EIF4EP4-201ENST00000424916 578 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 AL365400.1-201ENST00000431854 640 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXC4P09017 AL591806.2-201ENST00000433122 173 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXC4P09017 UBE2V1P7-201ENST00000446395 340 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 AL441985.1-201ENST00000457727 251 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 RNU7-167P-201ENST00000459160 62 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXC4P09017 RPL22P13-201ENST00000493291 347 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 SNORA14.1-201ENST00000516113 141 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 Y_RNA.682-201ENST00000516457 100 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 RNU6-1315P-201ENST00000517187 99 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC4P09017 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC4P09017 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXC4P09017 AL121821.2-201ENST00000556081 394 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 AC015712.3-201ENST00000559380 164 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 AC110588.1-201ENST00000559699 137 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 MIR4524B-201ENST00000581569 115 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 MIR5692C1-201ENST00000585309 91 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 U2.17-201ENST00000611454 95 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC4P09017 AC022418.1-201ENST00000624118 445 ntBASIC1.9□□□□□ -2.11
HOXC4P09017 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC4P09017 RNU4-79P-201ENST00000362764 141 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 Y_RNA.67-201ENST00000362870 100 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 RNU6-384P-201ENST00000364900 104 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC4P09017 Y_RNA.535-201ENST00000384612 99 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 RNU6-1179P-201ENST00000384667 107 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HOXC4P09017 RNU2-3P-201ENST00000410144 191 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 RNU6-1025P-201ENST00000410629 104 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 RNU6-1304P-201ENST00000411374 106 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC4P09017 ARL5AP1-201ENST00000418991 388 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 NDUFA5P4-201ENST00000436704 385 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 AC124916.1-201ENST00000444020 547 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC4P09017 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC4P09017 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC4P09017 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC4P09017 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC4P09017 AC104136.1-201ENST00000512969 394 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 Y_RNA.675-201ENST00000516389 149 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 Y_RNA.691-201ENST00000516611 103 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 RNU6-1069P-201ENST00000516612 133 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 RNU6-256P-201ENST00000516747 97 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 SNORA25.17-201ENST00000517184 124 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC4P09017 AL157871.3-201ENST00000557231 293 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 AL355375.2-201ENST00000574825 175 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC4P09017 MIR1273C-201ENST00000578669 77 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC4P09017 MIR548AC-201ENST00000585049 88 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 uc_338.5-201ENST00000611839 155 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 uc_338.15-201ENST00000615470 191 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 U4atac.1-201ENST00000618345 95 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 AC024581.2-201ENST00000619986 252 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC4P09017 MIR1302-1-201ENST00000637932 143 ntBASIC1.89□□□□□ -2.11
HOXC4P09017 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC4P09017 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.88□□□□□ -2.11
HOXC4P09017 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXC4P09017 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXC4P09017 SNORD113-7-201ENST00000363762 77 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 RNU6-266P-201ENST00000364225 107 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 Y_RNA.339-201ENST00000365325 102 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 Y_RNA.394-201ENST00000383942 103 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 Y_RNA.419-201ENST00000384041 102 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 RNU6-748P-201ENST00000384648 107 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 MT-TD-201ENST00000387419 68 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 EIF4E2P1-201ENST00000393781 255 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 MIR450B-201ENST00000401182 78 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 RNU6-607P-201ENST00000411283 108 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.88□□□□□ -2.11
HOXC4P09017 VN1R36P-201ENST00000414936 291 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 AL590632.1-201ENST00000424289 371 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC4P09017 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.88□□□□□ -2.11
HOXC4P09017 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.88□□□□□ -2.11
HOXC4P09017 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC4P09017 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC4P09017 RNU6-237P-201ENST00000515985 71 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 SNORA19.2-201ENST00000516013 114 ntBASIC1.88□□□□□ -2.11
HOXC4P09017 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms