Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU1-58P-201ENST00000362413 163 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 Y_RNA.409-201ENST00000383990 98 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 SNORA36A-201ENST00000384221 132 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 RNU6-1119P-201ENST00000384349 108 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 RNY3P9-201ENST00000384727 106 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 RNA5SP219-201ENST00000390940 113 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 Y_RNA.582-201ENST00000391023 95 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 RNA5SP465-201ENST00000391195 109 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 RNU4-55P-201ENST00000410731 137 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AL590556.1-201ENST00000423231 483 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 RPL23AP95-201ENST00000426806 265 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AL121601.2-201ENST00000438019 707 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 MTND2P29-201ENST00000438595 412 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AC098826.2-201ENST00000452011 651 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 MTCO2P18-201ENST00000457151 658 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AC023790.1-201ENST00000482174 347 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AC022447.4-201ENST00000504053 364 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AC010493.1-201ENST00000513479 292 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 SNORA40.12-201ENST00000516329 111 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AL118558.2-201ENST00000556294 238 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 MIR3611-201ENST00000584484 83 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 VN1R107P-201ENST00000601784 209 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 AC005034.5-201ENST00000604219 466 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 SNORA43.4-201ENST00000629559 138 ntBASIC1.41□□□□□ -2.18
HLA-DPB1P04440 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
HLA-DPB1P04440 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 SNORD114-6-201ENST00000364393 72 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 Y_RNA.255-201ENST00000364581 97 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 RNU6-142P-201ENST00000384019 107 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AL606923.1-201ENST00000406616 190 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 RN7SKP61-201ENST00000410642 295 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 RNA5SP501-201ENST00000410990 112 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AL663109.1-201ENST00000411498 844 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC007098.1-201ENST00000420122 367 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC244636.1-201ENST00000421152 228 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 VN1R108P-201ENST00000431580 830 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AL591806.2-201ENST00000433122 173 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 RPL31P3-201ENST00000458430 332 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 MTND4P7-201ENST00000523876 130 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AP005639.2-201ENST00000527592 928 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 VN1R80P-201ENST00000597126 338 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AP001836.1-201ENST00000604675 523 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AP000560.1-201ENST00000624150 1937 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 AC006026.1-201ENST00000444025 1803 ntBASIC1.4□□□□□ -2.19
HLA-DPB1P04440 Y_RNA.99-201ENST00000363138 105 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 SNORD116-9-201ENST00000384000 95 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 SNORD116-3-201ENST00000384287 95 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 SNORD116-1-201ENST00000384335 95 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 SNORD116-7-201ENST00000384404 95 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 SNORD116-5-201ENST00000384462 95 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 MIR764-201ENST00000390811 85 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 SNORA26.3-201ENST00000391119 136 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 MTCYBP2-201ENST00000407745 171 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 RNA5SP201-201ENST00000410316 124 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AL358453.1-201ENST00000422522 250 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AL133396.1-201ENST00000432048 687 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AC245102.2-201ENST00000448956 180 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 HMGN2P18-201ENST00000450680 270 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 ATP5EP1-201ENST00000510257 156 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 RNU6-548P-201ENST00000517083 115 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AC069113.1-201ENST00000517763 267 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 MIR3136-201ENST00000583498 78 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AC087683.1-201ENST00000591187 441 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AP000654.2-201ENST00000605633 586 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AL590240.4-201ENST00000616908 390 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms