Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL136964.1-201ENST00000622038 2990 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL3A1P02461 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL3A1P02461 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL3A1P02461 Y_RNA.324-201ENST00000365165 102 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 U8.8-201ENST00000365399 135 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 RNU6-378P-201ENST00000384324 107 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 SNORD58.1-201ENST00000391313 66 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 RNU6-607P-201ENST00000411283 108 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 EIF4EP2-201ENST00000422816 654 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.15□□□□□ -1.91
COL3A1P02461 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.15□□□□□ -1.91
COL3A1P02461 SNORA31.3-201ENST00000516029 96 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 SNORA70.14-201ENST00000516205 110 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.15□□□□□ -1.91
COL3A1P02461 SNRPGP16-201ENST00000533275 226 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL3A1P02461 CPDP1-201ENST00000579660 283 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 SNORD53-201ENST00000579969 78 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 AL645944.1-201ENST00000603857 493 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 AC010900.2-201ENST00000604508 210 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 BX284668.6-201ENST00000606899 438 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 AP001282.2-201ENST00000616149 309 ntBASIC3.15□□□□□ -1.91
COL3A1P02461 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.15□□□□□ -1.91
COL3A1P02461 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.15□□□□□ -1.91
COL3A1P02461 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.15□□□□□ -1.91
COL3A1P02461 Z75746.1-201ENST00000440243 2080 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL3A1P02461 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
COL3A1P02461 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL3A1P02461 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
COL3A1P02461 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL3A1P02461 Y_RNA.54-201ENST00000362766 105 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 RNY1-201ENST00000364228 113 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 Y_RNA.237-201ENST00000364439 102 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 MIR135A2-201ENST00000384854 100 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.14□□□□□ -1.91
COL3A1P02461 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL3A1P02461 RPEP5-201ENST00000441137 268 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 AC098869.1-201ENST00000481627 292 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.14□□□□□ -1.91
COL3A1P02461 AC113155.1-201ENST00000511141 769 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 AC008413.1-201ENST00000511864 177 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 Y_RNA.713-201ENST00000517013 96 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.14□□□□□ -1.91
COL3A1P02461 LRRC37A5P-203ENST00000580181 585 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.14□□□□□ -1.91
COL3A1P02461 MIR5007-201ENST00000583098 95 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 MIR3976-201ENST00000606807 139 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 AC127459.3-201ENST00000624328 466 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 AC241585.2-209ENST00000638217 143 ntBASIC3.14□□□□□ -1.91
COL3A1P02461 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
COL3A1P02461 ZNF299P-201ENST00000406845 1804 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 PHKBP1-201ENST00000450951 1951 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL3A1P02461 MIR21-201ENST00000362134 72 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 RNU6-989P-201ENST00000362756 107 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 Y_RNA.200-201ENST00000364018 102 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 Y_RNA.274-201ENST00000364714 101 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 Y_RNA.533-201ENST00000384596 114 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COL3A1P02461 RNU6-121P-201ENST00000410525 99 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 AC090774.1-201ENST00000435925 246 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.13□□□□□ -1.91
COL3A1P02461 RPL9P9-202ENST00000466501 579 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 RPS29P21-201ENST00000496272 170 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.13□□□□□ -1.91
COL3A1P02461 AC008716.1-201ENST00000511084 513 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.13□□□□□ -1.91
COL3A1P02461 AC022790.1-201ENST00000522872 204 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 IGKV3-31-201ENST00000523109 329 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.13□□□□□ -1.91
COL3A1P02461 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.13□□□□□ -1.91
COL3A1P02461 MIR5696-201ENST00000578474 85 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 MIR548AC-201ENST00000585049 88 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 AL121917.1-203ENST00000605534 577 ntBASIC3.13□□□□□ -1.91
COL3A1P02461 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.13□□□□□ -1.91
COL3A1P02461 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.12□□□□□ -1.91
COL3A1P02461 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL3A1P02461 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
COL3A1P02461 Y_RNA.27-201ENST00000362540 103 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 RNU6-545P-201ENST00000362681 104 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 Y_RNA.105-201ENST00000363182 111 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 RNU6-595P-201ENST00000363944 107 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 U3.13-201ENST00000364804 214 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 AL603910.2-201ENST00000407268 136 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 Y_RNA.592-201ENST00000410274 109 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 AL353621.1-201ENST00000418219 243 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 PPP1R11P2-201ENST00000423543 382 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL3A1P02461 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.12□□□□□ -1.91
COL3A1P02461 RN7SL499P-201ENST00000481141 276 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 RNU6-1095P-201ENST00000516148 108 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 RNU6-914P-201ENST00000516749 109 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.12□□□□□ -1.91
COL3A1P02461 AC021269.2-201ENST00000532318 330 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 TRAV32-201ENST00000553993 340 ntBASIC3.12□□□□□ -1.91
COL3A1P02461 MIR548AI-201ENST00000579940 88 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms