Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.08□□□□□ -2.42
TNFP01375 TPRKBP2-201ENST00000565969 475 ntBASIC-0.08□□□□□ -2.42
TNFP01375 SNORA59B-202ENST00000578183 701 ntBASIC-0.08□□□□□ -2.42
TNFP01375 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.08□□□□□ -2.42
TNFP01375 AC078938.1-201ENST00000620993 318 ntBASIC-0.08□□□□□ -2.42
TNFP01375 AL445264.1-201ENST00000621719 171 ntBASIC-0.08□□□□□ -2.42
TNFP01375 AL079343.1-201ENST00000572358 1771 ntBASIC-0.09□□□□□ -2.42
TNFP01375 RNU6-216P-201ENST00000363282 104 ntBASIC-0.09□□□□□ -2.42
TNFP01375 RNU6-438P-201ENST00000365561 103 ntBASIC-0.09□□□□□ -2.42
TNFP01375 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.09□□□□□ -2.42
TNFP01375 RNU6-815P-201ENST00000384080 113 ntBASIC-0.09□□□□□ -2.42
TNFP01375 SNORD41-201ENST00000386967 70 ntBASIC-0.09□□□□□ -2.42
TNFP01375 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.09□□□□□ -2.42
TNFP01375 RNA5SP222-201ENST00000411039 105 ntBASIC-0.09□□□□□ -2.42
TNFP01375 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.09□□□□□ -2.42
TNFP01375 PDCL2P1-201ENST00000419302 352 ntBASIC-0.09□□□□□ -2.42
TNFP01375 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.09□□□□□ -2.42
TNFP01375 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.09□□□□□ -2.42
TNFP01375 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
TNFP01375 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.09□□□□□ -2.42
TNFP01375 MIR4666A-201ENST00000580160 79 ntBASIC-0.09□□□□□ -2.42
TNFP01375 MIR3136-201ENST00000583498 78 ntBASIC-0.09□□□□□ -2.42
TNFP01375 AL513534.2-201ENST00000603836 250 ntBASIC-0.09□□□□□ -2.42
TNFP01375 AC007363.1-201ENST00000604736 620 ntBASIC-0.09□□□□□ -2.42
TNFP01375 AC097065.2-201ENST00000608159 533 ntBASIC-0.09□□□□□ -2.42
TNFP01375 RNU6-353P-201ENST00000364266 108 ntBASIC-0.1□□□□□ -2.43
TNFP01375 RNU6-534P-201ENST00000364877 106 ntBASIC-0.1□□□□□ -2.43
TNFP01375 RNU6-877P-201ENST00000383868 107 ntBASIC-0.1□□□□□ -2.43
TNFP01375 RNU6V-201ENST00000384105 107 ntBASIC-0.1□□□□□ -2.43
TNFP01375 CALM2P3-201ENST00000400429 449 ntBASIC-0.1□□□□□ -2.43
TNFP01375 AL359634.1-202ENST00000404721 284 ntBASIC-0.1□□□□□ -2.43
TNFP01375 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.1□□□□□ -2.43
TNFP01375 MTCO2P1-201ENST00000424648 477 ntBASIC-0.1□□□□□ -2.43
TNFP01375 HMGN2P34-201ENST00000437647 269 ntBASIC-0.1□□□□□ -2.43
TNFP01375 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.1□□□□□ -2.43
TNFP01375 NFU1P2-201ENST00000448700 469 ntBASIC-0.1□□□□□ -2.43
TNFP01375 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.1□□□□□ -2.43
TNFP01375 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.1□□□□□ -2.43
TNFP01375 RPF2P2-201ENST00000504693 896 ntBASIC-0.1□□□□□ -2.43
TNFP01375 AC121161.1-201ENST00000510606 652 ntBASIC-0.1□□□□□ -2.43
TNFP01375 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.1□□□□□ -2.43
TNFP01375 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.1□□□□□ -2.43
TNFP01375 RNU6-947P-201ENST00000516264 106 ntBASIC-0.1□□□□□ -2.43
TNFP01375 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.1□□□□□ -2.43
TNFP01375 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC-0.1□□□□□ -2.43
TNFP01375 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.1□□□□□ -2.43
TNFP01375 AL355816.2-201ENST00000610049 647 ntBASIC-0.1□□□□□ -2.43
TNFP01375 OR5AK4P-201ENST00000635912 903 ntBASIC-0.1□□□□□ -2.43
TNFP01375 MTND4P5-201ENST00000435821 1374 ntBASIC-0.1□□□□□ -2.43
TNFP01375 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
TNFP01375 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.11□□□□□ -2.43
TNFP01375 RNU6-756P-201ENST00000383997 107 ntBASIC-0.11□□□□□ -2.43
TNFP01375 RNU6-418P-201ENST00000384035 107 ntBASIC-0.11□□□□□ -2.43
TNFP01375 RNU6-163P-201ENST00000384396 106 ntBASIC-0.11□□□□□ -2.43
TNFP01375 RNU6-505P-201ENST00000384427 107 ntBASIC-0.11□□□□□ -2.43
TNFP01375 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.11□□□□□ -2.43
TNFP01375 MIR301A-201ENST00000385261 86 ntBASIC-0.11□□□□□ -2.43
TNFP01375 RNA5SP219-201ENST00000390940 113 ntBASIC-0.11□□□□□ -2.43
TNFP01375 SNORA12-201ENST00000391162 147 ntBASIC-0.11□□□□□ -2.43
TNFP01375 MIR548H2-201ENST00000408874 88 ntBASIC-0.11□□□□□ -2.43
TNFP01375 MTCO1P21-201ENST00000416634 589 ntBASIC-0.11□□□□□ -2.43
TNFP01375 C1DP2-201ENST00000418167 426 ntBASIC-0.11□□□□□ -2.43
TNFP01375 MTND4P25-201ENST00000441039 533 ntBASIC-0.11□□□□□ -2.43
TNFP01375 MTND5P2-201ENST00000442927 1142 ntBASIC-0.11□□□□□ -2.43
TNFP01375 C1DP4-201ENST00000455429 424 ntBASIC-0.11□□□□□ -2.43
TNFP01375 HMGN2P26-201ENST00000463169 339 ntBASIC-0.11□□□□□ -2.43
TNFP01375 RPL39P36-201ENST00000490784 156 ntBASIC-0.11□□□□□ -2.43
TNFP01375 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.11□□□□□ -2.43
TNFP01375 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.11□□□□□ -2.43
TNFP01375 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.11□□□□□ -2.43
TNFP01375 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.11□□□□□ -2.43
TNFP01375 MIR3678-201ENST00000578455 94 ntBASIC-0.11□□□□□ -2.43
TNFP01375 SNRPGP20-201ENST00000604477 205 ntBASIC-0.11□□□□□ -2.43
TNFP01375 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.11□□□□□ -2.43
TNFP01375 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.11□□□□□ -2.43
TNFP01375 7SK.10-201ENST00000621414 298 ntBASIC-0.11□□□□□ -2.43
TNFP01375 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
TNFP01375 SNORA75B-201ENST00000384053 137 ntBASIC-0.12□□□□□ -2.43
TNFP01375 SNORD116-13-201ENST00000384408 92 ntBASIC-0.12□□□□□ -2.43
TNFP01375 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
TNFP01375 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.12□□□□□ -2.43
TNFP01375 ELOCP30-201ENST00000447108 299 ntBASIC-0.12□□□□□ -2.43
TNFP01375 SNRPGP12-201ENST00000449481 213 ntBASIC-0.12□□□□□ -2.43
TNFP01375 U7.7-201ENST00000459276 60 ntBASIC-0.12□□□□□ -2.43
TNFP01375 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.12□□□□□ -2.43
TNFP01375 AC091874.1-201ENST00000511402 339 ntBASIC-0.12□□□□□ -2.43
TNFP01375 AC011406.1-201ENST00000512440 370 ntBASIC-0.12□□□□□ -2.43
TNFP01375 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.12□□□□□ -2.43
TNFP01375 AC106038.2-201ENST00000520706 568 ntBASIC-0.12□□□□□ -2.43
TNFP01375 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.12□□□□□ -2.43
TNFP01375 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.12□□□□□ -2.43
TNFP01375 AC090888.2-201ENST00000559765 1144 ntBASIC-0.12□□□□□ -2.43
TNFP01375 AC092325.1-201ENST00000566449 554 ntBASIC-0.12□□□□□ -2.43
TNFP01375 EIF1P4-201ENST00000572664 335 ntBASIC-0.12□□□□□ -2.43
TNFP01375 AC011195.1-201ENST00000578177 177 ntBASIC-0.12□□□□□ -2.43
TNFP01375 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.12□□□□□ -2.43
TNFP01375 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.13□□□□□ -2.43
TNFP01375 RNU4-48P-201ENST00000365559 182 ntBASIC-0.13□□□□□ -2.43
TNFP01375 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
TNFP01375 SNORD116-20-201ENST00000384529 92 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms