Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIR520A-201ENST00000384862 85 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 SNORA26.3-201ENST00000391119 136 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 RNU2-9P-201ENST00000410194 145 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 RNU2-7P-201ENST00000410794 178 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 MTCO2P34-201ENST00000421994 607 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 RPS27P16-201ENST00000425758 201 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 RPL23AP95-201ENST00000426806 265 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK1BO75841 AC245047.4-201ENST00000433189 144 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 JTBP1-201ENST00000441314 247 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 ATP5J2P3-201ENST00000451550 258 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 AC010531.2-201ENST00000465012 153 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 AC099513.1-201ENST00000490423 301 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 AC016632.1-201ENST00000503994 196 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.12□□□□□ -2.23
UPK1BO75841 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.12□□□□□ -2.23
UPK1BO75841 RNA5SP445-201ENST00000515889 115 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 RNU6-902P-201ENST00000517212 91 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 SNORA31.24-201ENST00000517232 57 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK1BO75841 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK1BO75841 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK1BO75841 EIF4A1P12-201ENST00000551910 141 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.12□□□□□ -2.23
UPK1BO75841 AC090517.1-201ENST00000569307 266 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 MIR3915-201ENST00000578518 97 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 AC069114.2-201ENST00000604699 304 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 ZNF72P-201ENST00000425869 1908 ntBASIC1.12□□□□□ -2.23
UPK1BO75841 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
UPK1BO75841 AC010615.1-201ENST00000594254 1764 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 MIR302D-201ENST00000362275 68 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 RNU4-21P-201ENST00000362802 126 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 SNORD31B-201ENST00000364977 69 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 MIR208B-201ENST00000401172 77 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK1BO75841 C8orf59P1-201ENST00000429930 303 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK1BO75841 RPL31P3-201ENST00000458430 332 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 AC007547.1-201ENST00000462177 490 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.11□□□□□ -2.23
UPK1BO75841 HMGN2P9-201ENST00000476875 229 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 RPL36AP21-201ENST00000490372 323 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 AC104564.1-201ENST00000493028 407 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UPK1BO75841 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.11□□□□□ -2.23
UPK1BO75841 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK1BO75841 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK1BO75841 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK1BO75841 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.11□□□□□ -2.23
UPK1BO75841 MIR6852-201ENST00000621699 66 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 SNORA43.4-201ENST00000629559 138 ntBASIC1.11□□□□□ -2.23
UPK1BO75841 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK1BO75841 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UPK1BO75841 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.11□□□□□ -2.23
UPK1BO75841 U8.2-201ENST00000363156 134 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 RNU6-181P-201ENST00000363225 107 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 RNU4-13P-201ENST00000364019 141 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 RNU6-877P-201ENST00000383868 107 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 RNU6-1026P-201ENST00000384465 108 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 RNU6-360P-201ENST00000390944 104 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.1□□□□□ -2.23
UPK1BO75841 AC245517.4-201ENST00000448601 281 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK1BO75841 AC016925.1-201ENST00000458303 298 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.1□□□□□ -2.23
UPK1BO75841 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.1□□□□□ -2.23
UPK1BO75841 AC091435.1-201ENST00000505442 584 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 AC108078.1-201ENST00000508073 725 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK1BO75841 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.1□□□□□ -2.23
UPK1BO75841 RNU6-1041P-201ENST00000516254 102 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 RNU6-445P-201ENST00000516949 107 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK1BO75841 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK1BO75841 CYP4A27P-201ENST00000567218 190 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 AC245014.2-201ENST00000603689 287 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 AP001836.1-201ENST00000604675 523 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 AC246785.4-201ENST00000605374 287 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 MIR3976-201ENST00000606807 139 ntBASIC1.1□□□□□ -2.23
UPK1BO75841 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
UPK1BO75841 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
UPK1BO75841 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.1□□□□□ -2.23
UPK1BO75841 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
UPK1BO75841 SNORD26-201ENST00000384147 75 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 RNU6-331P-201ENST00000384724 107 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 MIR583-201ENST00000384846 75 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 MT-TH-201ENST00000387441 69 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1BO75841 AL513185.2-201ENST00000425543 193 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.09□□□□□ -2.23
UPK1BO75841 SNRPGP9-201ENST00000456025 225 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 SNORD42A-201ENST00000459584 64 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 MTCYBP18-201ENST00000501056 747 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AC008628.2-201ENST00000502605 298 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK1BO75841 AP003033.1-201ENST00000527244 415 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AC084364.2-201ENST00000546924 395 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AC012414.6-201ENST00000568241 401 ntBASIC1.09□□□□□ -2.23
UPK1BO75841 AP005136.1-201ENST00000579765 429 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms