Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VAMP4O75379 AP003122.5-201ENST00000527668 3766 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VAMP4O75379 RNU6-1301P-201ENST00000362724 104 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 Y_RNA.84-201ENST00000363011 104 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 RNU6-270P-201ENST00000364131 105 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 RNU6-142P-201ENST00000384019 107 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 SNORA44-201ENST00000384584 132 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 RPL21P3-201ENST00000395517 478 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 RNU6-1077P-201ENST00000410506 102 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 AC096920.1-201ENST00000423991 241 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.83□□□□□ -1.8
VAMP4O75379 HMGN2P10-201ENST00000448085 265 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 AL353705.4-201ENST00000449661 238 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.83□□□□□ -1.8
VAMP4O75379 AC146507.2-201ENST00000460608 476 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 TOMM22P6-201ENST00000465035 409 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.83□□□□□ -1.8
VAMP4O75379 AC098869.1-201ENST00000481627 292 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.83□□□□□ -1.8
VAMP4O75379 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VAMP4O75379 AC093023.1-201ENST00000547375 507 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 AC020895.1-201ENST00000595362 272 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 AC005000.2-201ENST00000605468 310 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 Y_RNA.772-201ENST00000606692 102 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 MIR7153-201ENST00000637758 57 ntBASIC3.83□□□□□ -1.8
VAMP4O75379 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VAMP4O75379 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.82□□□□□ -1.8
VAMP4O75379 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.82□□□□□ -1.8
VAMP4O75379 Y_RNA.60-201ENST00000362831 98 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VAMP4O75379 FTH1P15-201ENST00000406984 280 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 RNU2-64P-201ENST00000411315 191 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 BPY2DP-201ENST00000422208 265 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.82□□□□□ -1.8
VAMP4O75379 AC004383.1-201ENST00000438135 289 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 AC016700.2-201ENST00000446011 156 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 MTND4LP30-201ENST00000454092 297 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 RPS29P26-201ENST00000477483 171 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 MRPL42P6-201ENST00000486397 371 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 SNORA31.6-201ENST00000516241 130 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 RNU6-928P-201ENST00000516876 104 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 AC019159.1-201ENST00000605094 187 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 AL162274.2-201ENST00000614406 332 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 AP001282.2-201ENST00000616149 309 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 AC137590.2-201ENST00000619709 240 ntBASIC3.82□□□□□ -1.8
VAMP4O75379 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.82□□□□□ -1.8
VAMP4O75379 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VAMP4O75379 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.82□□□□□ -1.8
VAMP4O75379 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VAMP4O75379 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAMP4O75379 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAMP4O75379 AC093831.2-201ENST00000624393 3427 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VAMP4O75379 AC103988.1-201ENST00000566382 2177 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 Y_RNA.20-201ENST00000362479 113 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 SNORD56.1-201ENST00000362913 68 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 RNU5B-2P-201ENST00000363036 113 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 RNU6-137P-201ENST00000363680 108 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 RNU6-1280P-201ENST00000365211 107 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 SNORA29-201ENST00000384183 140 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 SNORA1.3-201ENST00000384676 136 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 MIR153-2-201ENST00000385225 87 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.81□□□□□ -1.8
VAMP4O75379 AC099548.1-201ENST00000421443 426 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 TRIAP1P1-201ENST00000427062 225 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 RPL26P9-201ENST00000457466 433 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.81□□□□□ -1.8
VAMP4O75379 RPS23P5-201ENST00000495419 428 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.81□□□□□ -1.8
VAMP4O75379 SNORA31.23-201ENST00000517219 133 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 AC245166.1-201ENST00000521012 253 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 AC021739.1-201ENST00000559631 174 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.81□□□□□ -1.8
VAMP4O75379 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.81□□□□□ -1.8
VAMP4O75379 AC012433.1-201ENST00000588916 398 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.81□□□□□ -1.8
VAMP4O75379 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.81□□□□□ -1.8
VAMP4O75379 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.81□□□□□ -1.8
VAMP4O75379 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.81□□□□□ -1.8
VAMP4O75379 HAUS6P2-201ENST00000433254 2404 ntBASIC3.81□□□□□ -1.8
VAMP4O75379 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.81□□□□□ -1.8
VAMP4O75379 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VAMP4O75379 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.8□□□□□ -1.8
VAMP4O75379 AC110491.1-201ENST00000562191 2010 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VAMP4O75379 snoU2_19.2-201ENST00000363024 80 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 SNORD81.1-201ENST00000363064 77 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 Y_RNA.515-201ENST00000384535 112 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 MIR32-201ENST00000384965 70 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 RNA5SP213-201ENST00000391031 106 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 SNORD78.2-201ENST00000391076 69 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 RNU1-139P-201ENST00000391307 165 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 MRPL35P1-201ENST00000404272 572 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 MIR548H3-201ENST00000408771 118 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.8□□□□□ -1.8
VAMP4O75379 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.8□□□□□ -1.8
VAMP4O75379 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.8□□□□□ -1.8
VAMP4O75379 EIF1P2-201ENST00000428233 350 ntBASIC3.8□□□□□ -1.8
VAMP4O75379 RN7SL75P-201ENST00000461926 281 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms