Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RN7SKP132-201ENST00000516001 208 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AC022616.4-201ENST00000522985 181 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 MRPS36P4-201ENST00000534436 298 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 CR383656.8-201ENST00000549046 145 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1BO60663 AC004584.2-201ENST00000570407 410 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.45□□□□□ -2.02
LMX1BO60663 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.45□□□□□ -2.02
LMX1BO60663 AC078899.3-201ENST00000599065 212 ntBASIC2.45□□□□□ -2.02
LMX1BO60663 CUL1P1-201ENST00000509510 2425 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1BO60663 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.44□□□□□ -2.02
LMX1BO60663 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LMX1BO60663 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.44□□□□□ -2.02
LMX1BO60663 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1BO60663 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1BO60663 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1BO60663 RNU4-82P-201ENST00000362443 140 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 Y_RNA.123-201ENST00000363338 102 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 Y_RNA.149-201ENST00000363558 117 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 SNORD32A-201ENST00000364805 84 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 RNU6-708P-201ENST00000384217 107 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 SNORD88.1-201ENST00000408684 91 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 RNA5SP508-201ENST00000411327 119 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 DPH3P2-201ENST00000422618 250 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 TMEM167AP1-201ENST00000423409 219 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.44□□□□□ -2.02
LMX1BO60663 MTCO3P29-201ENST00000432119 779 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.44□□□□□ -2.02
LMX1BO60663 Z82188.1-201ENST00000436709 154 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.44□□□□□ -2.02
LMX1BO60663 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.44□□□□□ -2.02
LMX1BO60663 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.44□□□□□ -2.02
LMX1BO60663 AP001025.1-201ENST00000486139 332 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC093852.1-201ENST00000503587 266 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.44□□□□□ -2.02
LMX1BO60663 AC114801.2-201ENST00000503825 781 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 MRPS35P2-201ENST00000508242 191 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.44□□□□□ -2.02
LMX1BO60663 RNU6-635P-201ENST00000516651 102 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 Y_RNA.715-201ENST00000517082 110 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 SNORA31.23-201ENST00000517219 133 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC109329.1-201ENST00000518744 317 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.44□□□□□ -2.02
LMX1BO60663 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.44□□□□□ -2.02
LMX1BO60663 AC040926.1-201ENST00000530195 238 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 HSBP1P1-201ENST00000555205 166 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.44□□□□□ -2.02
LMX1BO60663 AC021739.1-201ENST00000559631 174 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC006600.1-201ENST00000572529 153 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 MIR3609-201ENST00000582661 80 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC010928.2-201ENST00000588017 287 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC016727.2-201ENST00000603988 621 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AL355297.3-201ENST00000604082 446 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 Z98751.3-201ENST00000604447 521 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 AC124312.5-201ENST00000604451 268 ntBASIC2.44□□□□□ -2.02
LMX1BO60663 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1BO60663 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.44□□□□□ -2.02
LMX1BO60663 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
LMX1BO60663 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMX1BO60663 AC062016.1-201ENST00000355719 319 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 Y_RNA.176-201ENST00000363815 109 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 Y_RNA.214-201ENST00000364201 112 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 SNORD14.1-201ENST00000365609 90 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 Y_RNA.380-201ENST00000365663 111 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 MIR196B-201ENST00000384852 84 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 SNORA12.2-201ENST00000391040 156 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 RPS4XP3-201ENST00000398541 413 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 Y_RNA.592-201ENST00000410274 109 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 RNA5SP344-201ENST00000411081 104 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMX1BO60663 AC074117.2-201ENST00000417130 397 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.43□□□□□ -2.02
LMX1BO60663 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1BO60663 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1BO60663 AL731563.1-201ENST00000442202 214 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 EEF1B2P7-201ENST00000451177 676 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 OR2AQ1P-201ENST00000451972 200 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1BO60663 RNU7-169P-201ENST00000459456 61 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 RN7SL297P-201ENST00000483161 293 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 MRPL42P6-201ENST00000486397 371 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 RNU6-581P-201ENST00000516214 105 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 RNU7-4P-201ENST00000516961 62 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.43□□□□□ -2.02
LMX1BO60663 AC131281.1-201ENST00000522984 164 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LMX1BO60663 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.43□□□□□ -2.02
LMX1BO60663 AC004817.2-201ENST00000561794 651 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 MYL12BP1-201ENST00000569826 507 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 HMGN2P15-201ENST00000585707 270 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 AC023043.3-201ENST00000593113 385 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 VN1R91P-201ENST00000594377 169 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 U4.1-201ENST00000620349 87 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 AC006111.3-201ENST00000622137 383 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 SNORA43.4-201ENST00000629559 138 ntBASIC2.43□□□□□ -2.02
LMX1BO60663 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.43□□□□□ -2.02
LMX1BO60663 AC010680.1-201ENST00000590024 3590 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
LMX1BO60663 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms