Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 AC016957.1-201ENST00000534895 309 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.17□□□□□ -2.44
SSSCA1O60232 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC-0.17□□□□□ -2.44
SSSCA1O60232 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.17□□□□□ -2.44
SSSCA1O60232 SNRPGP20-201ENST00000604477 205 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 MIR4315-1-201ENST00000636800 73 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 MIR4315-2-201ENST00000640925 73 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 AL079343.1-201ENST00000572358 1771 ntBASIC-0.17□□□□□ -2.44
SSSCA1O60232 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
SSSCA1O60232 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 RNU4-15P-201ENST00000362613 141 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 SNORD56.1-201ENST00000362913 68 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 SNORA42.1-201ENST00000363515 137 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
SSSCA1O60232 RNU6-701P-201ENST00000384059 107 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 RNU6-817P-201ENST00000391083 104 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.18□□□□□ -2.44
SSSCA1O60232 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.18□□□□□ -2.44
SSSCA1O60232 MTND1P31-201ENST00000449206 961 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.18□□□□□ -2.44
SSSCA1O60232 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.18□□□□□ -2.44
SSSCA1O60232 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
SSSCA1O60232 RPL39P39-201ENST00000455840 151 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 AC010531.2-201ENST00000465012 153 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 RNU6-863P-201ENST00000515989 104 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 MTND1P36-201ENST00000522384 936 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 AC010620.1-201ENST00000601088 1102 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.18□□□□□ -2.44
SSSCA1O60232 AL136363.2-201ENST00000604173 851 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 AC005332.6-201ENST00000613178 446 ntBASIC-0.18□□□□□ -2.44
SSSCA1O60232 MTND4P5-201ENST00000435821 1374 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 RNA5SP214-201ENST00000363378 118 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 SNORA75B-201ENST00000384053 137 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 RNU6V-201ENST00000384105 107 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 RNA5SP63-201ENST00000391225 112 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.19□□□□□ -2.44
SSSCA1O60232 FCF1P10-201ENST00000407590 479 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 AL034345.1-201ENST00000407768 123 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 AL359704.1-201ENST00000411586 781 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 AL591704.1-201ENST00000432574 275 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 SEPT7P5-201ENST00000434048 306 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 RPL37P21-201ENST00000435890 276 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 MRPL42P4-201ENST00000453267 443 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC021146.8-201ENST00000507455 733 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.19□□□□□ -2.44
SSSCA1O60232 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.19□□□□□ -2.44
SSSCA1O60232 AC027514.1-201ENST00000588561 1603 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 RNU4-48P-201ENST00000365559 182 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 RNU6-877P-201ENST00000383868 107 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.2□□□□□ -2.44
SSSCA1O60232 BX664727.1-201ENST00000416024 466 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.2□□□□□ -2.44
SSSCA1O60232 RPL23AP50-201ENST00000434149 455 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 AC002486.1-201ENST00000435098 391 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.2□□□□□ -2.44
SSSCA1O60232 MTND2P20-201ENST00000440805 661 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.2□□□□□ -2.44
SSSCA1O60232 AC067940.1-201ENST00000458411 300 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.2□□□□□ -2.44
SSSCA1O60232 RNA5SP436-201ENST00000516020 115 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 SNORA70.12-201ENST00000516084 153 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 RNA5SP227-201ENST00000516184 113 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 RNU6-64P-201ENST00000517119 105 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 SUB1P2-201ENST00000556401 297 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.2□□□□□ -2.44
SSSCA1O60232 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.2□□□□□ -2.44
SSSCA1O60232 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 RPL23AP91-201ENST00000569211 455 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 MIR4293-201ENST00000584305 78 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 AL357312.1-201ENST00000603879 298 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 AC018889.1-201ENST00000605372 397 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 AC112204.3-201ENST00000623822 332 ntBASIC-0.2□□□□□ -2.44
SSSCA1O60232 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
SSSCA1O60232 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.21□□□□□ -2.44
SSSCA1O60232 SNORD114-5-201ENST00000362928 70 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 SNORA72.2-201ENST00000365028 127 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 RNU6-481P-201ENST00000384194 107 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 RNU6-1105P-201ENST00000384774 107 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 MIR520F-201ENST00000384824 87 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 RN7SKP266-201ENST00000410232 287 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 AC010154.1-201ENST00000425857 269 ntBASIC-0.21□□□□□ -2.44
SSSCA1O60232 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms