Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.66□□□□□ -2.3
SSNA1O43805 MIR338-201ENST00000636369 67 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RNU4-79P-201ENST00000362764 141 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 SNORA26.3-201ENST00000391119 136 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 AC063976.4-201ENST00000421971 163 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 RAB28P5-201ENST00000427490 651 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 AC078809.1-201ENST00000427601 140 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 RPL39P38-201ENST00000467018 153 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.65□□□□□ -2.31
SSNA1O43805 MTCO2P2-201ENST00000591258 225 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.65□□□□□ -2.31
SSNA1O43805 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.65□□□□□ -2.31
SSNA1O43805 MIR6078-201ENST00000611069 100 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 AL133216.2-202ENST00000634512 349 ntBASIC0.65□□□□□ -2.31
SSNA1O43805 RNU6-660P-201ENST00000364566 109 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 Y_RNA.324-201ENST00000365165 102 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 MIR608-201ENST00000384820 100 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
SSNA1O43805 SNORD115.1-201ENST00000391109 76 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 USP9YP28-201ENST00000435142 589 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.64□□□□□ -2.31
SSNA1O43805 GAPDHP17-201ENST00000449858 1001 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.64□□□□□ -2.31
SSNA1O43805 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.64□□□□□ -2.31
SSNA1O43805 RPS23P5-201ENST00000495419 428 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 HMGN1P12-201ENST00000499125 195 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 AC112204.1-201ENST00000502591 103 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 AC067942.3-201ENST00000512025 362 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.64□□□□□ -2.31
SSNA1O43805 AC021506.2-201ENST00000612354 169 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 AL607023.1-201ENST00000620045 248 ntBASIC0.64□□□□□ -2.31
SSNA1O43805 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.64□□□□□ -2.31
SSNA1O43805 AC092268.1-201ENST00000342691 405 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 RNU6-545P-201ENST00000362681 104 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 RNU6-552P-201ENST00000362869 119 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 Y_RNA.124-201ENST00000363339 93 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 SNORA72.2-201ENST00000365028 127 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 RNU6-533P-201ENST00000384144 107 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 RNU6-45P-201ENST00000384471 107 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 RNU6-636P-201ENST00000384598 107 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 MIR605-201ENST00000385078 83 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 ELOCP4-201ENST00000420090 333 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.63□□□□□ -2.31
SSNA1O43805 AC011233.1-201ENST00000422812 283 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 RPL23AP95-201ENST00000426806 265 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AC002429.1-201ENST00000437672 148 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 GTF2IP13-201ENST00000438487 386 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AC048334.1-201ENST00000477975 159 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.63□□□□□ -2.31
SSNA1O43805 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.63□□□□□ -2.31
SSNA1O43805 SNORA31.4-201ENST00000516049 129 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SSNA1O43805 AC136628.3-201ENST00000521868 290 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.63□□□□□ -2.31
SSNA1O43805 TPRKBP2-201ENST00000565969 475 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.63□□□□□ -2.31
SSNA1O43805 MIR4513-201ENST00000581077 86 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 Z98751.3-201ENST00000604447 521 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AC064872.1-201ENST00000604823 1072 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AC104010.1-201ENST00000616889 150 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AC004808.1-201ENST00000627671 721 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 AL450472.1-202ENST00000637286 180 ntBASIC0.63□□□□□ -2.31
SSNA1O43805 BX322639.1-202ENST00000423987 2213 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.62□□□□□ -2.31
SSNA1O43805 RNU6-157P-201ENST00000383957 107 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 RNU6-116P-201ENST00000384042 109 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 Y_RNA.576-201ENST00000384781 102 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 MTCO2P21-201ENST00000419780 677 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 HSFY7P-201ENST00000432672 318 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 HSFY8P-201ENST00000437934 318 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 AL133217.1-201ENST00000450980 425 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.62□□□□□ -2.31
SSNA1O43805 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.62□□□□□ -2.31
SSNA1O43805 AC090142.3-201ENST00000519012 385 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 AC023050.3-201ENST00000541142 333 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 CYP4A27P-201ENST00000567218 190 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 TMF1P1-201ENST00000576058 373 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 AC008751.2-201ENST00000597885 980 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 AL929325.1-201ENST00000603096 117 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 AC016727.2-201ENST00000603988 621 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 AC009994.1-201ENST00000606889 253 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 AC009509.4-201ENST00000619202 509 ntBASIC0.62□□□□□ -2.31
SSNA1O43805 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SSNA1O43805 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.62□□□□□ -2.31
SSNA1O43805 RNU6-179P-201ENST00000363350 107 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 RNU6-1303P-201ENST00000364841 107 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 SNORA36A-201ENST00000384221 132 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 MIR532-201ENST00000385025 91 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 AL133396.1-201ENST00000432048 687 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 SNAP23P1-201ENST00000433229 246 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.61□□□□□ -2.31
SSNA1O43805 AC092991.1-201ENST00000477176 376 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 AC091874.1-201ENST00000511402 339 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 AL121579.1-201ENST00000555129 305 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 MIR5695-201ENST00000579717 85 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 AC022432.1-201ENST00000595739 310 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 RPL17P51-201ENST00000605218 238 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms