Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PROM1O43490 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.09□□□□□ -1.92
PROM1O43490 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.09□□□□□ -1.92
PROM1O43490 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.09□□□□□ -1.92
PROM1O43490 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.92
PROM1O43490 AC138915.1-201ENST00000565427 1685 ntBASIC3.08□□□□□ -1.92
PROM1O43490 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PROM1O43490 AC008264.2-201ENST00000610193 3731 ntBASIC3.08□□□□□ -1.92
PROM1O43490 Y_RNA.27-201ENST00000362540 103 ntBASIC3.08□□□□□ -1.92
PROM1O43490 RNU6-379P-201ENST00000363813 104 ntBASIC3.08□□□□□ -1.92
PROM1O43490 Y_RNA.483-201ENST00000384380 101 ntBASIC3.08□□□□□ -1.92
PROM1O43490 Y_RNA.489-201ENST00000384410 101 ntBASIC3.08□□□□□ -1.92
PROM1O43490 RPL21P75-201ENST00000396599 483 ntBASIC3.08□□□□□ -1.92
PROM1O43490 RPL21P28-201ENST00000401418 483 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AL590556.1-201ENST00000423231 483 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.08□□□□□ -1.92
PROM1O43490 RPEP5-201ENST00000441137 268 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AC009296.1-201ENST00000443146 155 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AL031659.1-201ENST00000447075 539 ntBASIC3.08□□□□□ -1.92
PROM1O43490 FCF1P4-201ENST00000448326 183 ntBASIC3.08□□□□□ -1.92
PROM1O43490 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.08□□□□□ -1.92
PROM1O43490 RPL21P39-201ENST00000463605 483 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AC087190.1-201ENST00000484462 480 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AC107032.1-201ENST00000485945 480 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AC132942.1-201ENST00000486753 483 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AC093591.1-201ENST00000491435 481 ntBASIC3.08□□□□□ -1.92
PROM1O43490 RPL21P16-201ENST00000495531 483 ntBASIC3.08□□□□□ -1.92
PROM1O43490 ANXA2P1-201ENST00000505539 926 ntBASIC3.08□□□□□ -1.92
PROM1O43490 RNU6-388P-201ENST00000517012 105 ntBASIC3.08□□□□□ -1.92
PROM1O43490 RNU6-389P-201ENST00000517048 105 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.08□□□□□ -1.92
PROM1O43490 AL391261.3-201ENST00000557194 520 ntBASIC3.08□□□□□ -1.92
PROM1O43490 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.08□□□□□ -1.92
PROM1O43490 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.08□□□□□ -1.92
PROM1O43490 MIR7112-201ENST00000616126 65 ntBASIC3.08□□□□□ -1.92
PROM1O43490 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PROM1O43490 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PROM1O43490 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PROM1O43490 Y_RNA.376-201ENST00000365638 108 ntBASIC3.07□□□□□ -1.92
PROM1O43490 RNU6-472P-201ENST00000384299 107 ntBASIC3.07□□□□□ -1.92
PROM1O43490 MIR544A-201ENST00000384855 91 ntBASIC3.07□□□□□ -1.92
PROM1O43490 MIR32-201ENST00000384965 70 ntBASIC3.07□□□□□ -1.92
PROM1O43490 MT-TW-201ENST00000387382 68 ntBASIC3.07□□□□□ -1.92
PROM1O43490 UBA52P6-201ENST00000399822 382 ntBASIC3.07□□□□□ -1.92
PROM1O43490 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.07□□□□□ -1.92
PROM1O43490 AC074117.2-201ENST00000417130 397 ntBASIC3.07□□□□□ -1.92
PROM1O43490 EIF1AXP1-201ENST00000419267 435 ntBASIC3.07□□□□□ -1.92
PROM1O43490 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.07□□□□□ -1.92
PROM1O43490 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.07□□□□□ -1.92
PROM1O43490 RPS26P21-201ENST00000475397 348 ntBASIC3.07□□□□□ -1.92
PROM1O43490 RPL23AP75-201ENST00000491601 451 ntBASIC3.07□□□□□ -1.92
PROM1O43490 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.07□□□□□ -1.92
PROM1O43490 RAC1P5-201ENST00000512182 576 ntBASIC3.07□□□□□ -1.92
PROM1O43490 RNU6-408P-201ENST00000515910 100 ntBASIC3.07□□□□□ -1.92
PROM1O43490 RNU2-53P-201ENST00000516257 147 ntBASIC3.07□□□□□ -1.92
PROM1O43490 AC022868.1-201ENST00000517767 391 ntBASIC3.07□□□□□ -1.92
PROM1O43490 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.07□□□□□ -1.92
PROM1O43490 AP003733.2-201ENST00000529409 171 ntBASIC3.07□□□□□ -1.92
PROM1O43490 AL442163.3-201ENST00000554110 156 ntBASIC3.07□□□□□ -1.92
PROM1O43490 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.07□□□□□ -1.92
PROM1O43490 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.07□□□□□ -1.92
PROM1O43490 MIR3124-201ENST00000582636 67 ntBASIC3.07□□□□□ -1.92
PROM1O43490 AC010928.2-201ENST00000588017 287 ntBASIC3.07□□□□□ -1.92
PROM1O43490 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.07□□□□□ -1.92
PROM1O43490 SCARNA4-201ENST00000629045 128 ntBASIC3.07□□□□□ -1.92
PROM1O43490 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PROM1O43490 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PROM1O43490 RNU6-222P-201ENST00000362438 107 ntBASIC3.06□□□□□ -1.92
PROM1O43490 DYNLT3P1-201ENST00000378574 347 ntBASIC3.06□□□□□ -1.92
PROM1O43490 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PROM1O43490 RNU6-1286P-201ENST00000383871 107 ntBASIC3.06□□□□□ -1.92
PROM1O43490 RNU6-142P-201ENST00000384019 107 ntBASIC3.06□□□□□ -1.92
PROM1O43490 Y_RNA.447-201ENST00000384184 113 ntBASIC3.06□□□□□ -1.92
PROM1O43490 Y_RNA.504-201ENST00000384481 104 ntBASIC3.06□□□□□ -1.92
PROM1O43490 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
PROM1O43490 RNU6-847P-201ENST00000411115 108 ntBASIC3.06□□□□□ -1.92
PROM1O43490 HMGN2P10-201ENST00000448085 265 ntBASIC3.06□□□□□ -1.92
PROM1O43490 U8.22-201ENST00000459141 133 ntBASIC3.06□□□□□ -1.92
PROM1O43490 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
PROM1O43490 MED28P2-201ENST00000475771 317 ntBASIC3.06□□□□□ -1.92
PROM1O43490 RPL30P1-201ENST00000488676 339 ntBASIC3.06□□□□□ -1.92
PROM1O43490 AC010469.2-201ENST00000496412 480 ntBASIC3.06□□□□□ -1.92
PROM1O43490 CR383656.8-201ENST00000549046 145 ntBASIC3.06□□□□□ -1.92
PROM1O43490 AC007375.1-201ENST00000554513 578 ntBASIC3.06□□□□□ -1.92
PROM1O43490 AC021739.1-201ENST00000559631 174 ntBASIC3.06□□□□□ -1.92
PROM1O43490 MIR4506-201ENST00000584693 77 ntBASIC3.06□□□□□ -1.92
PROM1O43490 HMGN2P15-201ENST00000585707 270 ntBASIC3.06□□□□□ -1.92
PROM1O43490 AC005357.1-201ENST00000588399 301 ntBASIC3.06□□□□□ -1.92
PROM1O43490 AC010615.1-201ENST00000594254 1764 ntBASIC3.06□□□□□ -1.92
PROM1O43490 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.06□□□□□ -1.92
PROM1O43490 MIR3199-2-201ENST00000636243 86 ntBASIC3.06□□□□□ -1.92
PROM1O43490 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PROM1O43490 AC110491.1-201ENST00000562191 2010 ntBASIC3.05□□□□□ -1.92
PROM1O43490 Y_RNA.183-201ENST00000363882 113 ntBASIC3.05□□□□□ -1.92
PROM1O43490 Y_RNA.510-201ENST00000384511 114 ntBASIC3.05□□□□□ -1.92
PROM1O43490 RNA5SP354-201ENST00000391247 136 ntBASIC3.05□□□□□ -1.92
PROM1O43490 RNU2-38P-201ENST00000410856 79 ntBASIC3.05□□□□□ -1.92
PROM1O43490 RNU6-130P-201ENST00000411112 103 ntBASIC3.05□□□□□ -1.92
PROM1O43490 BPY2DP-201ENST00000422208 265 ntBASIC3.05□□□□□ -1.92
PROM1O43490 AC244505.4-201ENST00000434905 287 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms