Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
FOXN1O15353 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
FOXN1O15353 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXN1O15353 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
FOXN1O15353 Y_RNA.200-201ENST00000364018 102 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 RNU6-76P-201ENST00000384060 104 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 MIR521-1-201ENST00000384902 87 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 SNORD115-46-201ENST00000390982 71 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 AL606753.1-201ENST00000427435 87 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 AL592045.1-201ENST00000429867 352 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 AL138752.1-201ENST00000452964 351 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 RNU6-1037P-201ENST00000459571 107 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 RPS15AP34-201ENST00000487776 387 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 AC010469.2-201ENST00000496412 480 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 AC067942.3-201ENST00000512025 362 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXN1O15353 SNORA31.6-201ENST00000516241 130 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXN1O15353 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.41□□□□□ -1.86
FOXN1O15353 AC008962.1-201ENST00000605729 304 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.41□□□□□ -1.86
FOXN1O15353 Z99571.1-201ENST00000636677 394 ntBASIC3.41□□□□□ -1.86
FOXN1O15353 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
FOXN1O15353 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
FOXN1O15353 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
FOXN1O15353 AP001148.1-201ENST00000624124 2359 ntBASIC3.4□□□□□ -1.86
FOXN1O15353 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
FOXN1O15353 Y_RNA.16-201ENST00000362421 102 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 RNU6-545P-201ENST00000362681 104 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXN1O15353 Y_RNA.464-201ENST00000384282 110 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.4□□□□□ -1.87
FOXN1O15353 AL049830.2-201ENST00000480072 201 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.4□□□□□ -1.87
FOXN1O15353 AC006445.2-201ENST00000510061 472 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 RNU6-1338P-201ENST00000516328 91 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 Y_RNA.713-201ENST00000517013 96 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 AC027176.1-201ENST00000560204 514 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 AC136932.1-201ENST00000574771 208 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 BX284668.6-201ENST00000606899 438 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXN1O15353 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXN1O15353 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXN1O15353 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.4□□□□□ -1.87
FOXN1O15353 MTND5P9-201ENST00000503854 1755 ntBASIC3.4□□□□□ -1.87
FOXN1O15353 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXN1O15353 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FOXN1O15353 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.39□□□□□ -1.87
FOXN1O15353 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXN1O15353 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
FOXN1O15353 UBE2L2-201ENST00000254302 429 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 Y_RNA.27-201ENST00000362540 103 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-37P-201ENST00000362692 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-1266P-201ENST00000362794 105 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-11P-201ENST00000364234 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNA5SP189-201ENST00000364920 115 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNA5SP167-201ENST00000365461 116 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-25P-201ENST00000383873 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-1-201ENST00000383898 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-48P-201ENST00000384161 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-36P-201ENST00000384172 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-4P-201ENST00000384205 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-5P-201ENST00000384238 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-3P-201ENST00000384314 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-16P-201ENST00000384385 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-15P-201ENST00000384534 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-2-201ENST00000384627 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-29P-201ENST00000384637 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-9-201ENST00000384776 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 MIR607-201ENST00000385241 96 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 AC009963.1-201ENST00000417265 157 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 MTND3P9-201ENST00000429526 346 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.39□□□□□ -1.87
FOXN1O15353 AC010285.1-201ENST00000470580 392 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 AC087190.1-201ENST00000484462 480 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 AC107032.1-201ENST00000485945 480 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.39□□□□□ -1.87
FOXN1O15353 RN7SKP43-201ENST00000516173 320 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 MIR892C-201ENST00000516410 77 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 MIR4643-201ENST00000577473 78 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.39□□□□□ -1.87
FOXN1O15353 AC010620.2-201ENST00000600135 313 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RNU6-6P-201ENST00000606623 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 AC034102.8-201ENST00000615146 484 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 RMST_4.1-201ENST00000616886 107 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 MIR4275-201ENST00000636486 87 ntBASIC3.39□□□□□ -1.87
FOXN1O15353 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
FOXN1O15353 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.39□□□□□ -1.87
FOXN1O15353 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.39□□□□□ -1.87
FOXN1O15353 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXN1O15353 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXN1O15353 RNU6-1159P-201ENST00000362933 107 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 RNU6-125P-201ENST00000384505 107 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
FOXN1O15353 RNU6-882P-201ENST00000391025 103 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 RNU6-493P-201ENST00000391321 108 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 MIR1298-201ENST00000408783 112 ntBASIC3.38□□□□□ -1.87
FOXN1O15353 AL096701.2-201ENST00000416920 238 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms