Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RPS26P48-201ENST00000491713 339 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 HMGN1P12-201ENST00000499125 195 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 RNU5F-4P-201ENST00000516581 114 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AC087854.1-201ENST00000519706 414 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 ADI1P3-201ENST00000549509 470 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 ZNF321P-202ENST00000550843 495 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 TPRKBP2-201ENST00000565969 475 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AC133485.1-201ENST00000567176 124 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AC138907.6-201ENST00000568401 126 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AL513534.2-201ENST00000603836 250 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 RPL17P51-201ENST00000605218 238 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 BNIP3P10-201ENST00000605360 577 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AP002360.4-201ENST00000606980 481 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AC012409.4-201ENST00000612923 249 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AL121895.2-201ENST00000619558 447 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AC136475.10-201ENST00000620253 385 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AL356596.1-201ENST00000624230 379 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AC126544.2-201ENST00000625174 749 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.4□□□□□ -2.35
HMGB3O15347 MIR6767-201ENST00000637302 66 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 AC106858.1-201ENST00000637497 429 ntBASIC0.4□□□□□ -2.35
HMGB3O15347 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
HMGB3O15347 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HMGB3O15347 RNU6-433P-201ENST00000363216 104 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 RNU6-43P-201ENST00000384302 107 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 SNORA80D-201ENST00000384488 135 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 FGF7P8-201ENST00000402994 292 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 AL590135.1-201ENST00000422215 156 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 AC019205.3-201ENST00000424573 156 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 AC244670.1-201ENST00000436879 112 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.39□□□□□ -2.35
HMGB3O15347 AC016700.2-201ENST00000446011 156 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 RN7SL429P-201ENST00000479090 223 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 RN7SL489P-201ENST00000486185 223 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 RN7SL327P-201ENST00000488659 223 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 AC015911.1-201ENST00000495111 156 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.39□□□□□ -2.35
HMGB3O15347 AC011979.2-201ENST00000527568 352 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 MIR3923-201ENST00000579521 83 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 MIR5695-201ENST00000579717 85 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 RN7SL853P-201ENST00000617250 223 ntBASIC0.39□□□□□ -2.35
HMGB3O15347 Y_RNA.132-201ENST00000363421 102 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 RNU6-877P-201ENST00000383868 107 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 ERHP2-201ENST00000402323 299 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 RNU6-1245P-201ENST00000411130 106 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.38□□□□□ -2.35
HMGB3O15347 EEF1A1P40-201ENST00000412883 573 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
HMGB3O15347 AC010975.2-201ENST00000427781 588 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 MTND1P18-201ENST00000448191 573 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 snoU13.23-201ENST00000458863 104 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AC092991.1-201ENST00000477176 376 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AL163540.1-201ENST00000485382 386 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.38□□□□□ -2.35
HMGB3O15347 HMGN1P7-201ENST00000491722 313 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AC005840.1-201ENST00000498412 377 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGB3O15347 AC091435.1-201ENST00000505442 584 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AC116353.3-201ENST00000511215 249 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 RNU6-201P-201ENST00000517100 61 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AC107934.1-201ENST00000522215 217 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.38□□□□□ -2.35
HMGB3O15347 APOOP3-201ENST00000536787 586 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.38□□□□□ -2.35
HMGB3O15347 AC009509.4-201ENST00000619202 509 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 MIR5087-201ENST00000635826 76 ntBASIC0.38□□□□□ -2.35
HMGB3O15347 AC073343.1-201ENST00000328239 651 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 RNU4-56P-201ENST00000364700 142 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 RNY4P16-201ENST00000364768 94 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 RNU4-12P-201ENST00000365233 139 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 RNU6-17P-201ENST00000384245 107 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 Y_RNA.472-201ENST00000384322 102 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 RNU6-18P-201ENST00000384527 107 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.37□□□□□ -2.35
HMGB3O15347 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.37□□□□□ -2.35
HMGB3O15347 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGB3O15347 AL353777.1-201ENST00000425552 326 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AC078809.1-201ENST00000427601 140 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AC073614.1-201ENST00000438690 650 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGB3O15347 MTCYBP1-201ENST00000454315 1119 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.37□□□□□ -2.35
HMGB3O15347 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
HMGB3O15347 RNU6-123P-201ENST00000516163 102 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 RNU7-51P-201ENST00000516560 62 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AC018659.1-201ENST00000551083 169 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 EIF4A1P12-201ENST00000551910 141 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.37□□□□□ -2.35
HMGB3O15347 AC064872.1-201ENST00000604823 1072 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AL139286.2-201ENST00000606838 396 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AL139022.2-201ENST00000606934 443 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.37□□□□□ -2.35
HMGB3O15347 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 Z69720.2-201ENST00000624755 279 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 SNORD3E-202ENST00000627253 216 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 AC091948.2-201ENST00000636510 279 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 ELL2P3-201ENST00000457883 1602 ntBASIC0.37□□□□□ -2.35
HMGB3O15347 BX322639.1-202ENST00000423987 2213 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms