Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL132765.2-201ENST00000610812 351 ntBASIC2.02□□□□□ -2.09
CDX4O14627 uc_338.5-201ENST00000611839 155 ntBASIC2.02□□□□□ -2.09
CDX4O14627 AC011890.2-201ENST00000613393 294 ntBASIC2.02□□□□□ -2.09
CDX4O14627 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.02□□□□□ -2.09
CDX4O14627 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.02□□□□□ -2.09
CDX4O14627 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.02□□□□□ -2.09
CDX4O14627 MTND4P27-201ENST00000450813 1354 ntBASIC2.01□□□□□ -2.09
CDX4O14627 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDX4O14627 RNU6-694P-201ENST00000364071 147 ntBASIC2.01□□□□□ -2.09
CDX4O14627 RNU5E-7P-201ENST00000365290 117 ntBASIC2.01□□□□□ -2.09
CDX4O14627 RNU6-487P-201ENST00000365430 104 ntBASIC2.01□□□□□ -2.09
CDX4O14627 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CDX4O14627 Y_RNA.508-201ENST00000384502 114 ntBASIC2.01□□□□□ -2.09
CDX4O14627 MT-TD-201ENST00000387419 68 ntBASIC2.01□□□□□ -2.09
CDX4O14627 MIR450B-201ENST00000401182 78 ntBASIC2.01□□□□□ -2.09
CDX4O14627 CYCSP33-201ENST00000414485 327 ntBASIC2.01□□□□□ -2.09
CDX4O14627 VN1R36P-201ENST00000414936 291 ntBASIC2.01□□□□□ -2.09
CDX4O14627 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.01□□□□□ -2.09
CDX4O14627 SUMO1P4-201ENST00000429430 302 ntBASIC2.01□□□□□ -2.09
CDX4O14627 MTND4LP16-201ENST00000440828 295 ntBASIC2.01□□□□□ -2.09
CDX4O14627 snoU109.2-201ENST00000459316 135 ntBASIC2.01□□□□□ -2.09
CDX4O14627 MTND4P17-201ENST00000470444 350 ntBASIC2.01□□□□□ -2.09
CDX4O14627 RPL36AP48-201ENST00000485521 314 ntBASIC2.01□□□□□ -2.09
CDX4O14627 AC018437.1-201ENST00000492214 406 ntBASIC2.01□□□□□ -2.09
CDX4O14627 TRBVA-201ENST00000498804 316 ntBASIC2.01□□□□□ -2.09
CDX4O14627 AC023141.11-201ENST00000508864 202 ntBASIC2.01□□□□□ -2.09
CDX4O14627 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.01□□□□□ -2.09
CDX4O14627 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.01□□□□□ -2.09
CDX4O14627 Y_RNA.682-201ENST00000516457 100 ntBASIC2.01□□□□□ -2.09
CDX4O14627 RNU6-1069P-201ENST00000516612 133 ntBASIC2.01□□□□□ -2.09
CDX4O14627 RNU6-256P-201ENST00000516747 97 ntBASIC2.01□□□□□ -2.09
CDX4O14627 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.01□□□□□ -2.09
CDX4O14627 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.01□□□□□ -2.09
CDX4O14627 AC093027.1-201ENST00000546698 429 ntBASIC2.01□□□□□ -2.09
CDX4O14627 CR383656.8-201ENST00000549046 145 ntBASIC2.01□□□□□ -2.09
CDX4O14627 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.01□□□□□ -2.09
CDX4O14627 MIR3199-1-201ENST00000582434 88 ntBASIC2.01□□□□□ -2.09
CDX4O14627 MIR4795-201ENST00000584182 89 ntBASIC2.01□□□□□ -2.09
CDX4O14627 Y_RNA.783-201ENST00000613546 102 ntBASIC2.01□□□□□ -2.09
CDX4O14627 uc_338.15-201ENST00000615470 191 ntBASIC2.01□□□□□ -2.09
CDX4O14627 AC009233.1-201ENST00000616477 371 ntBASIC2.01□□□□□ -2.09
CDX4O14627 AC244517.12-201ENST00000623581 663 ntBASIC2.01□□□□□ -2.09
CDX4O14627 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
CDX4O14627 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2□□□□□ -2.09
CDX4O14627 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2□□□□□ -2.09
CDX4O14627 MIR378A-201ENST00000362177 66 ntBASIC2□□□□□ -2.09
CDX4O14627 Y_RNA.58-201ENST00000362807 102 ntBASIC2□□□□□ -2.09
CDX4O14627 Y_RNA.154-201ENST00000363624 102 ntBASIC2□□□□□ -2.09
CDX4O14627 SNORA38-201ENST00000363946 132 ntBASIC2□□□□□ -2.09
CDX4O14627 RNU6-266P-201ENST00000364225 107 ntBASIC2□□□□□ -2.09
CDX4O14627 RNY3P1-201ENST00000365085 102 ntBASIC2□□□□□ -2.09
CDX4O14627 Y_RNA.324-201ENST00000365165 102 ntBASIC2□□□□□ -2.09
CDX4O14627 U8.8-201ENST00000365399 135 ntBASIC2□□□□□ -2.09
CDX4O14627 Y_RNA.355-201ENST00000365462 98 ntBASIC2□□□□□ -2.09
CDX4O14627 RNY3-201ENST00000365484 102 ntBASIC2□□□□□ -2.09
CDX4O14627 Y_RNA.490-201ENST00000384413 102 ntBASIC2□□□□□ -2.09
CDX4O14627 RNU6-843P-201ENST00000384454 104 ntBASIC2□□□□□ -2.09
CDX4O14627 Y_RNA.509-201ENST00000384506 99 ntBASIC2□□□□□ -2.09
CDX4O14627 RNU6-220P-201ENST00000390919 107 ntBASIC2□□□□□ -2.09
CDX4O14627 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2□□□□□ -2.09
CDX4O14627 RNU2-3P-201ENST00000410144 191 ntBASIC2□□□□□ -2.09
CDX4O14627 RNU6-321P-201ENST00000410912 106 ntBASIC2□□□□□ -2.09
CDX4O14627 AL139156.1-201ENST00000412785 841 ntBASIC2□□□□□ -2.09
CDX4O14627 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2□□□□□ -2.09
CDX4O14627 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2□□□□□ -2.09
CDX4O14627 AC097463.2-201ENST00000421074 142 ntBASIC2□□□□□ -2.09
CDX4O14627 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2□□□□□ -2.09
CDX4O14627 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2□□□□□ -2.09
CDX4O14627 AC004383.1-201ENST00000438135 289 ntBASIC2□□□□□ -2.09
CDX4O14627 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2□□□□□ -2.09
CDX4O14627 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2□□□□□ -2.09
CDX4O14627 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2□□□□□ -2.09
CDX4O14627 FGF7P4-201ENST00000509595 295 ntBASIC2□□□□□ -2.09
CDX4O14627 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2□□□□□ -2.09
CDX4O14627 Y_RNA.675-201ENST00000516389 149 ntBASIC2□□□□□ -2.09
CDX4O14627 SNORA25.17-201ENST00000517184 124 ntBASIC2□□□□□ -2.09
CDX4O14627 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2□□□□□ -2.09
CDX4O14627 RNU6-323P-201ENST00000521915 107 ntBASIC2□□□□□ -2.09
CDX4O14627 AP000889.2-201ENST00000532684 490 ntBASIC2□□□□□ -2.09
CDX4O14627 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2□□□□□ -2.09
CDX4O14627 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2□□□□□ -2.09
CDX4O14627 AL049779.4-201ENST00000604500 156 ntBASIC2□□□□□ -2.09
CDX4O14627 AL670379.2-201ENST00000604983 252 ntBASIC2□□□□□ -2.09
CDX4O14627 AC069294.1-201ENST00000608397 350 ntBASIC2□□□□□ -2.09
CDX4O14627 FAM157A-202ENST00000615155 405 ntBASIC2□□□□□ -2.09
CDX4O14627 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
CDX4O14627 RNU6-942P-201ENST00000363002 107 ntBASIC1.99□□□□□ -2.09
CDX4O14627 Y_RNA.118-201ENST00000363300 101 ntBASIC1.99□□□□□ -2.09
CDX4O14627 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
CDX4O14627 Y_RNA.269-201ENST00000364685 89 ntBASIC1.99□□□□□ -2.09
CDX4O14627 RNU1-138P-201ENST00000384093 164 ntBASIC1.99□□□□□ -2.09
CDX4O14627 RNU6-1013P-201ENST00000384180 107 ntBASIC1.99□□□□□ -2.09
CDX4O14627 U6atac.2-201ENST00000408644 118 ntBASIC1.99□□□□□ -2.09
CDX4O14627 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.99□□□□□ -2.09
CDX4O14627 AC138623.1-201ENST00000418060 216 ntBASIC1.99□□□□□ -2.09
CDX4O14627 Z82205.1-201ENST00000428456 297 ntBASIC1.99□□□□□ -2.09
CDX4O14627 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.99□□□□□ -2.09
CDX4O14627 AC080013.2-201ENST00000460866 323 ntBASIC1.99□□□□□ -2.09
CDX4O14627 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.99□□□□□ -2.09
CDX4O14627 RNU6-277P-201ENST00000516272 106 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms