Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU6-1-201ENST00000383898 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-533P-201ENST00000384144 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-48P-201ENST00000384161 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-36P-201ENST00000384172 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-4P-201ENST00000384205 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-5P-201ENST00000384238 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-3P-201ENST00000384314 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-16P-201ENST00000384385 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-15P-201ENST00000384534 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-2-201ENST00000384627 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-29P-201ENST00000384637 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-9-201ENST00000384776 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-33P-201ENST00000384793 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 MIR122-201ENST00000385044 85 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.65□□□□□ -2.31
SDCBPO00560 RPS4XP11-201ENST00000446897 772 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 snoU13.27-201ENST00000459278 104 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-1041P-201ENST00000516254 102 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.65□□□□□ -2.31
SDCBPO00560 MTND4LP18-201ENST00000526864 291 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.65□□□□□ -2.31
SDCBPO00560 AL442163.3-201ENST00000554110 156 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.65□□□□□ -2.31
SDCBPO00560 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.65□□□□□ -2.31
SDCBPO00560 AL121992.2-201ENST00000606262 256 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 RNU6-6P-201ENST00000606623 107 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 BX284668.6-201ENST00000606899 438 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 AL031775.1-201ENST00000607014 887 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 AC012676.2-201ENST00000619258 186 ntBASIC0.65□□□□□ -2.31
SDCBPO00560 AL391994.1-201ENST00000254724 282 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 MIR337-201ENST00000362281 93 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU1-96P-201ENST00000364163 162 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 SNORD32A-201ENST00000364805 84 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU6-1303P-201ENST00000364841 107 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU6-336P-201ENST00000364891 107 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU6-641P-201ENST00000384006 107 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU6-1200P-201ENST00000384162 107 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU6-378P-201ENST00000384324 107 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 SNORA25-201ENST00000384384 134 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU6-1065P-201ENST00000384513 106 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 MIR515-2-201ENST00000384883 83 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 MIR515-1-201ENST00000384884 83 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
SDCBPO00560 EBAG9P1-201ENST00000418955 543 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 MED13P1-201ENST00000428342 171 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 USP9YP14-201ENST00000430663 563 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC244670.1-201ENST00000436879 112 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RPS24P1-201ENST00000438550 371 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.64□□□□□ -2.31
SDCBPO00560 AC073910.1-201ENST00000445047 438 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.64□□□□□ -2.31
SDCBPO00560 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.64□□□□□ -2.31
SDCBPO00560 AC016925.1-201ENST00000458303 298 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU7-14P-201ENST00000459331 62 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC007547.1-201ENST00000462177 490 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.64□□□□□ -2.31
SDCBPO00560 AC117522.1-201ENST00000509821 380 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC079140.3-201ENST00000511111 550 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC074344.1-201ENST00000512823 224 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU6-165P-201ENST00000517170 99 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
SDCBPO00560 AC091489.2-201ENST00000566263 604 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 MIR3664-201ENST00000579074 99 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 MIR5692A1-201ENST00000580523 69 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC008088.1-201ENST00000580993 280 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 MIR4742-201ENST00000581069 85 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 MIR3136-201ENST00000583498 78 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 BNIP3P8-201ENST00000597863 560 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC078795.3-201ENST00000602913 472 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC105148.1-201ENST00000604961 409 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC018714.1-201ENST00000605028 208 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 RNU6-87P-201ENST00000607561 108 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC126177.8-201ENST00000618339 1015 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AL450472.1-202ENST00000637286 180 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 AC068647.2-201ENST00000637380 353 ntBASIC0.64□□□□□ -2.31
SDCBPO00560 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SDCBPO00560 SNORA33-201ENST00000363664 130 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 RNU6-1141P-201ENST00000364520 107 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 SNORD31B-201ENST00000364977 69 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 Y_RNA.576-201ENST00000384781 102 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 HIGD1AP15-201ENST00000416198 280 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 ARL5AP1-201ENST00000418991 388 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 SNX2P2-201ENST00000424553 323 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.63□□□□□ -2.31
SDCBPO00560 MTATP6P16-201ENST00000434543 526 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 AL133217.1-201ENST00000450980 425 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 snoU109.3-201ENST00000459477 145 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 MTCO2P29-201ENST00000465212 189 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 AL163195.1-201ENST00000496941 348 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 AC112204.1-201ENST00000502591 103 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 RNA5SP481-201ENST00000516814 122 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 RN7SKP88-201ENST00000516847 250 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 RNA5SP102-201ENST00000516865 106 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 SNORD60.2-201ENST00000516883 86 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.63□□□□□ -2.31
SDCBPO00560 AC211469.2-201ENST00000605461 205 ntBASIC0.63□□□□□ -2.31
SDCBPO00560 AL022345.2-201ENST00000606307 135 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms