Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL161670.1-201ENST00000554348 137 ntBASIC1.03□□□□□ -2.24
UPK2O00526 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.03□□□□□ -2.24
UPK2O00526 AC005668.1-201ENST00000571142 476 ntBASIC1.03□□□□□ -2.24
UPK2O00526 MIR4303-201ENST00000581299 66 ntBASIC1.03□□□□□ -2.24
UPK2O00526 AC069114.2-201ENST00000604699 304 ntBASIC1.03□□□□□ -2.24
UPK2O00526 Z84480.1-201ENST00000605131 311 ntBASIC1.03□□□□□ -2.24
UPK2O00526 Z99289.3-201ENST00000605586 594 ntBASIC1.03□□□□□ -2.24
UPK2O00526 MIR3976-201ENST00000606807 139 ntBASIC1.03□□□□□ -2.24
UPK2O00526 MIR7843-201ENST00000622274 79 ntBASIC1.03□□□□□ -2.24
UPK2O00526 MTND4P14-201ENST00000435799 1354 ntBASIC1.03□□□□□ -2.24
UPK2O00526 RNU6-552P-201ENST00000362869 119 ntBASIC1.02□□□□□ -2.25
UPK2O00526 Y_RNA.504-201ENST00000384481 104 ntBASIC1.02□□□□□ -2.25
UPK2O00526 MIR454-201ENST00000390180 115 ntBASIC1.02□□□□□ -2.25
UPK2O00526 MRPL35P1-201ENST00000404272 572 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AL117339.3-201ENST00000418733 162 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK2O00526 SNAP23P1-201ENST00000433229 246 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AL596276.1-201ENST00000434465 418 ntBASIC1.02□□□□□ -2.25
UPK2O00526 MTND4P4-201ENST00000439033 1366 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AC027119.1-201ENST00000440877 241 ntBASIC1.02□□□□□ -2.25
UPK2O00526 OR2AQ1P-201ENST00000451972 200 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AC013470.1-201ENST00000453438 462 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK2O00526 AK3P2-201ENST00000507976 429 ntBASIC1.02□□□□□ -2.25
UPK2O00526 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK2O00526 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.02□□□□□ -2.25
UPK2O00526 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.02□□□□□ -2.25
UPK2O00526 RNU6-1041P-201ENST00000516254 102 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.02□□□□□ -2.25
UPK2O00526 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.02□□□□□ -2.25
UPK2O00526 MIR3937-201ENST00000580135 106 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AC010615.1-201ENST00000594254 1764 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AC091805.2-201ENST00000603848 235 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AC002044.1-201ENST00000606707 158 ntBASIC1.02□□□□□ -2.25
UPK2O00526 MIR98-201ENST00000606724 119 ntBASIC1.02□□□□□ -2.25
UPK2O00526 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.02□□□□□ -2.25
UPK2O00526 AL450472.1-202ENST00000637286 180 ntBASIC1.02□□□□□ -2.25
UPK2O00526 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.01□□□□□ -2.25
UPK2O00526 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
UPK2O00526 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.01□□□□□ -2.25
UPK2O00526 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
UPK2O00526 RNU1-17P-201ENST00000363022 152 ntBASIC1.01□□□□□ -2.25
UPK2O00526 SNORD31B-201ENST00000364977 69 ntBASIC1.01□□□□□ -2.25
UPK2O00526 RNU6-393P-201ENST00000384475 107 ntBASIC1.01□□□□□ -2.25
UPK2O00526 RNU6-360P-201ENST00000390944 104 ntBASIC1.01□□□□□ -2.25
UPK2O00526 SNORD70.1-201ENST00000391007 85 ntBASIC1.01□□□□□ -2.25
UPK2O00526 RPS29P13-201ENST00000402041 169 ntBASIC1.01□□□□□ -2.25
UPK2O00526 RN7SKP61-201ENST00000410642 295 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC078809.1-201ENST00000427601 140 ntBASIC1.01□□□□□ -2.25
UPK2O00526 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK2O00526 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK2O00526 PRPS1P1-201ENST00000445305 876 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC079781.2-201ENST00000446424 169 ntBASIC1.01□□□□□ -2.25
UPK2O00526 RNU7-182P-201ENST00000459009 62 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC091435.1-201ENST00000505442 584 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.01□□□□□ -2.25
UPK2O00526 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK2O00526 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.01□□□□□ -2.25
UPK2O00526 AC084364.2-201ENST00000546924 395 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.01□□□□□ -2.25
UPK2O00526 AC012414.6-201ENST00000568241 401 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC090517.1-201ENST00000569307 266 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AP003465.2-201ENST00000602571 373 ntBASIC1.01□□□□□ -2.25
UPK2O00526 Z98751.3-201ENST00000604447 521 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC008945.2-201ENST00000606056 604 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC022960.3-201ENST00000619794 441 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AL603839.4-201ENST00000624658 1005 ntBASIC1.01□□□□□ -2.25
UPK2O00526 SEPT14P19-203ENST00000633205 211 ntBASIC1.01□□□□□ -2.25
UPK2O00526 AC091812.1-201ENST00000432235 1948 ntBASIC1.01□□□□□ -2.25
UPK2O00526 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
UPK2O00526 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1□□□□□ -2.25
UPK2O00526 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1□□□□□ -2.25
UPK2O00526 RNU1-96P-201ENST00000364163 162 ntBASIC1□□□□□ -2.25
UPK2O00526 RNU6-877P-201ENST00000383868 107 ntBASIC1□□□□□ -2.25
UPK2O00526 RNU6-1026P-201ENST00000384465 108 ntBASIC1□□□□□ -2.25
UPK2O00526 SNORA16.2-201ENST00000390991 127 ntBASIC1□□□□□ -2.25
UPK2O00526 SNORA40.6-201ENST00000391153 128 ntBASIC1□□□□□ -2.25
UPK2O00526 EBAG9P1-201ENST00000418955 543 ntBASIC1□□□□□ -2.25
UPK2O00526 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
UPK2O00526 TOMM22P2-201ENST00000430735 237 ntBASIC1□□□□□ -2.25
UPK2O00526 AL121890.1-201ENST00000435457 205 ntBASIC1□□□□□ -2.25
UPK2O00526 AC009961.2-201ENST00000435771 251 ntBASIC1□□□□□ -2.25
UPK2O00526 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1□□□□□ -2.25
UPK2O00526 RPS29P29-201ENST00000456396 171 ntBASIC1□□□□□ -2.25
UPK2O00526 AC016925.1-201ENST00000458303 298 ntBASIC1□□□□□ -2.25
UPK2O00526 RPL31P3-201ENST00000458430 332 ntBASIC1□□□□□ -2.25
UPK2O00526 RNU7-125P-201ENST00000458760 62 ntBASIC1□□□□□ -2.25
UPK2O00526 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1□□□□□ -2.25
UPK2O00526 AC004223.1-201ENST00000479840 271 ntBASIC1□□□□□ -2.25
UPK2O00526 AL133373.1-201ENST00000497098 94 ntBASIC1□□□□□ -2.25
UPK2O00526 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1□□□□□ -2.25
UPK2O00526 RNU2-69P-201ENST00000516061 100 ntBASIC1□□□□□ -2.25
UPK2O00526 SNORD27.1-201ENST00000516319 72 ntBASIC1□□□□□ -2.25
UPK2O00526 SNORA25.17-201ENST00000517184 124 ntBASIC1□□□□□ -2.25
UPK2O00526 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1□□□□□ -2.25
UPK2O00526 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1□□□□□ -2.25
UPK2O00526 AC090115.3-201ENST00000553218 849 ntBASIC1□□□□□ -2.25
UPK2O00526 DNAJC19P9-201ENST00000555084 351 ntBASIC1□□□□□ -2.25
UPK2O00526 AP005136.1-201ENST00000579765 429 ntBASIC1□□□□□ -2.25
UPK2O00526 AC092354.1-201ENST00000606057 376 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms