Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 AC117525.1-201ENST00000515228 503 ntBASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 AK6P2-201ENST00000549020 471 ntBASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 MIR4742-201ENST00000581069 85 ntBASIC-0.93□□□□□ -2.56
LINC01549A6NIU2 RNU6-543P-201ENST00000362576 108 ntBASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 AL353752.1-201ENST00000454946 260 ntBASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 RNU6-390P-201ENST00000516259 103 ntBASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.94□□□□□ -2.56
LINC01549A6NIU2 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 MIR653-201ENST00000385279 96 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 RNU6-127P-201ENST00000390897 107 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 RNU6-269P-201ENST00000391077 97 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 RNA5SP300-201ENST00000391197 107 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 SNORA75.6-201ENST00000391318 127 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 MIR548H2-201ENST00000408874 88 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 AC027644.1-201ENST00000419595 298 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 MTND4LP11-201ENST00000422184 280 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 RPS15AP10-201ENST00000432472 382 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 AC010469.2-201ENST00000496412 480 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 VN1R83P-201ENST00000595685 445 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 AL034555.1-201ENST00000604816 211 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 AC010133.1-201ENST00000615809 842 ntBASIC-0.95□□□□□ -2.56
LINC01549A6NIU2 ENSAP3-201ENST00000312710 333 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 RNY4P16-201ENST00000364768 94 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 MIR196A2-201ENST00000385189 110 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 PCNPP3-201ENST00000393579 471 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 RPL21P24-201ENST00000413752 448 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 RAC1P6-201ENST00000423911 575 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 HMGN2P22-201ENST00000427588 175 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 snoU13.14-201ENST00000459372 104 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 AC013828.1-201ENST00000481845 158 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 RNU1-86P-201ENST00000516108 154 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 RNU6-927P-201ENST00000516199 100 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 RNU1-107P-201ENST00000516617 154 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 AC078795.2-201ENST00000602835 1252 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 MIR3666-201ENST00000607845 111 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 AL391903.3-201ENST00000612158 163 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 MIR6079-201ENST00000635807 62 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 MTND4P4-201ENST00000439033 1366 ntBASIC-0.96□□□□□ -2.56
LINC01549A6NIU2 BTF3L4P3-201ENST00000418879 476 ntBASIC-0.97□□□□□ -2.56
LINC01549A6NIU2 Z99497.1-201ENST00000421282 135 ntBASIC-0.97□□□□□ -2.56
LINC01549A6NIU2 FABP5P15-201ENST00000453566 214 ntBASIC-0.97□□□□□ -2.56
LINC01549A6NIU2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.97□□□□□ -2.56
LINC01549A6NIU2 AC009646.1-201ENST00000510455 318 ntBASIC-0.97□□□□□ -2.56
LINC01549A6NIU2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.97□□□□□ -2.56
LINC01549A6NIU2 AC106754.2-201ENST00000623006 233 ntBASIC-0.97□□□□□ -2.56
LINC01549A6NIU2 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 GPM6BP2-201ENST00000432046 144 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 LARP1BP3-201ENST00000437229 869 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 USP9YP22-201ENST00000438971 294 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 GPM6BP1-201ENST00000446387 144 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 RNU7-165P-201ENST00000458864 60 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 SUMO2P14-201ENST00000604488 293 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 AL158211.4-201ENST00000606988 584 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 AL109933.3-201ENST00000619095 188 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 uc_338.16-201ENST00000621804 95 ntBASIC-0.98□□□□□ -2.57
LINC01549A6NIU2 Y_RNA.40-201ENST00000362645 93 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 RNU6-679P-201ENST00000391003 106 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 RNU6-284P-201ENST00000411105 106 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 AL592310.1-201ENST00000414330 671 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 AC016925.1-201ENST00000458303 298 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 AF038458.1-201ENST00000588406 262 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 AL670379.3-201ENST00000605040 251 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 AC011921.3-201ENST00000605540 361 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 AL118556.2-201ENST00000614375 824 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 AC063943.3-201ENST00000615562 356 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 AC004009.2-201ENST00000623016 728 ntBASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.99□□□□□ -2.57
LINC01549A6NIU2 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms