Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 Y_RNA.116-201ENST00000363292 103 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 SNORD114-23-201ENST00000363536 72 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 SNORD31B-201ENST00000364977 69 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 Y_RNA.408-201ENST00000383987 102 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 MIR10A-201ENST00000385043 110 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 MIR216A-201ENST00000385063 110 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AC016925.1-201ENST00000458303 298 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 RNU7-90P-201ENST00000459216 62 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AC121161.1-201ENST00000510606 652 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AL022154.1-201ENST00000604698 785 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AL034555.1-201ENST00000604816 211 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AC092354.1-201ENST00000606057 376 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AC023158.2-201ENST00000614876 543 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 AC004808.1-201ENST00000627671 721 ntBASIC0.06□□□□□ -2.4
TRAV12-3A0A0B4J271 RNU6-278P-201ENST00000390945 109 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 SNORA16.2-201ENST00000390991 127 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 MIR1295A-201ENST00000408463 79 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AL359704.1-201ENST00000411586 781 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 RPL22P18-201ENST00000417197 377 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AC073614.1-201ENST00000438690 650 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AL031313.1-201ENST00000448435 256 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AL353718.1-201ENST00000451028 517 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AC007395.1-201ENST00000451333 677 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 HMGN1P12-201ENST00000499125 195 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AC027338.1-201ENST00000514840 825 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 RNY4P37-201ENST00000516225 96 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 RNU6-677P-201ENST00000516914 101 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 RNU6-856P-201ENST00000516959 98 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AC115990.1-201ENST00000526957 301 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AC090888.2-201ENST00000559765 1144 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 TPRKBP2-201ENST00000565969 475 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 MIR5708-201ENST00000579723 85 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AC025627.3-201ENST00000582078 182 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 OR4H6P-202ENST00000603819 340 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 CTHRC1P1-201ENST00000605383 469 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 MIR15A-201ENST00000607334 83 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 AC099654.8-201ENST00000637757 681 ntBASIC0.05□□□□□ -2.4
TRAV12-3A0A0B4J271 MTND5P16-201ENST00000460269 1703 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 RNU6-1285P-201ENST00000363480 105 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 SNORA72.2-201ENST00000365028 127 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 RNU6-163P-201ENST00000384396 106 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 RNU6-505P-201ENST00000384427 107 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 SNORD89-201ENST00000390981 114 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 ZFAND6P1-201ENST00000434138 605 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 DAP3P1-201ENST00000441522 278 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AP000542.1-201ENST00000448473 371 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AL049830.1-201ENST00000468034 425 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AC022447.4-201ENST00000504053 364 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AC007834.2-201ENST00000536310 343 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AL929325.1-201ENST00000603096 117 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 AC124016.2-201ENST00000610058 665 ntBASIC0.04□□□□□ -2.4
TRAV12-3A0A0B4J271 SMIM11P1-201ENST00000369586 178 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 RPS3AP36-201ENST00000398190 775 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 C1DP2-201ENST00000418167 426 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 MRPS36P1-201ENST00000421291 307 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AC060773.1-201ENST00000421698 310 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AL158053.1-201ENST00000441503 453 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 NFU1P2-201ENST00000448700 469 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 C1DP4-201ENST00000455429 424 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 U7.7-201ENST00000459276 60 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AC119751.4-201ENST00000507498 357 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AC105313.1-201ENST00000509121 353 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 MTND3P5-201ENST00000512798 333 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 MIR3146-201ENST00000580367 79 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AC080078.2-201ENST00000603766 501 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 MIR8084-201ENST00000614105 89 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 AC024940.5-201ENST00000622889 474 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 MIR338-201ENST00000636369 67 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 MTND4P5-201ENST00000435821 1374 ntBASIC0.03□□□□□ -2.4
TRAV12-3A0A0B4J271 Y_RNA.122-201ENST00000363331 96 ntBASIC0.02□□□□□ -2.41
TRAV12-3A0A0B4J271 RNU5A-8P-201ENST00000364102 114 ntBASIC0.02□□□□□ -2.41
TRAV12-3A0A0B4J271 RNU6-777P-201ENST00000364265 104 ntBASIC0.02□□□□□ -2.41
TRAV12-3A0A0B4J271 RNU6-142P-201ENST00000384019 107 ntBASIC0.02□□□□□ -2.41
TRAV12-3A0A0B4J271 SNORD116-13-201ENST00000384408 92 ntBASIC0.02□□□□□ -2.41
TRAV12-3A0A0B4J271 RNU6-45P-201ENST00000384471 107 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 231.2 ms