Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC008521.1-201ENST00000587471 187 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC012507.3-201ENST00000603556 477 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC083806.3-201ENST00000614016 455 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC106800.4-201ENST00000614905 153 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 Z69720.2-201ENST00000624755 279 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-527P-201ENST00000363425 104 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU4-92P-201ENST00000363783 136 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU1-96P-201ENST00000364163 162 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-1141P-201ENST00000364520 107 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 SNORD114-22-201ENST00000365423 72 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 SNORD115.1-201ENST00000391109 76 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU2-64P-201ENST00000411315 191 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 PIGFP2-201ENST00000421400 651 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AC007395.1-201ENST00000451333 677 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AC010531.2-201ENST00000465012 153 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-165P-201ENST00000517170 99 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AC105185.1-201ENST00000518705 535 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 MIR4742-201ENST00000581069 85 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AC110760.3-201ENST00000598794 467 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 CTHRC1P1-201ENST00000605383 469 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 AL353149.1-201ENST00000610667 244 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 MTND4P16-201ENST00000466108 1367 ntBASIC0.56□□□□□ -2.32
TRAV1-1A0A0B4J248 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 Y_RNA.97-201ENST00000363094 102 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-43P-201ENST00000384302 107 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 SNORA24.1-201ENST00000384401 135 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 SNORA26.3-201ENST00000391119 136 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU11-5P-201ENST00000391216 129 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 AL356776.1-201ENST00000406574 447 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 USP9YP14-201ENST00000430663 563 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 Z73417.1-201ENST00000447373 778 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-1098P-201ENST00000516772 96 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-467P-201ENST00000517027 110 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 AC109446.1-201ENST00000566172 220 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 MIR5692A1-201ENST00000580523 69 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 AC073539.2-201ENST00000597113 165 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 PCGEM1.1-201ENST00000613431 131 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 AC097372.5-201ENST00000623665 376 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 AC006927.4-201ENST00000639187 543 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 AC245060.5-201ENST00000610778 3293 ntBASIC0.55□□□□□ -2.32
TRAV1-1A0A0B4J248 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU1-76P-201ENST00000362903 159 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-931P-201ENST00000363850 107 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-331P-201ENST00000384724 107 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-1000P-201ENST00000391066 106 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 HIGD1AP15-201ENST00000416198 280 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC114482.1-201ENST00000418010 247 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC078809.1-201ENST00000427601 140 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC244670.1-201ENST00000436879 112 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 MTND3P25-201ENST00000509243 135 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 SCARNA16.2-201ENST00000516520 172 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-856P-201ENST00000516959 98 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-685P-201ENST00000517088 95 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC090888.2-201ENST00000559765 1144 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC008088.1-201ENST00000580993 280 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 MIR151B-201ENST00000584249 96 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 VN1R107P-201ENST00000601784 209 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC107304.1-201ENST00000604229 296 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 RPL17P51-201ENST00000605218 238 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AL021879.1-201ENST00000611756 288 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC040896.1-201ENST00000613819 479 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC008147.4-201ENST00000617570 1204 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AL157786.1-207ENST00000627771 695 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 AC068647.2-201ENST00000637380 353 ntBASIC0.54□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-1123P-201ENST00000362347 106 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 U3.4-201ENST00000363352 213 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-39P-201ENST00000384344 107 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 Y_RNA.508-201ENST00000384502 114 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-757P-201ENST00000410334 100 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AC060773.1-201ENST00000421698 310 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AC010975.2-201ENST00000427781 588 ntBASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.53□□□□□ -2.32
TRAV1-1A0A0B4J248 AC073910.1-201ENST00000445047 438 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms