Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AL354696.1-201ENST00000614652 497 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 SCARNA4-202ENST00000625402 129 ntBASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.04□□□□□ -2.42
TRAV1-2A0A0B4J238 MIR412-201ENST00000362142 91 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 MIR103A1-201ENST00000362165 78 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 RNY1P8-201ENST00000383970 114 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AC002486.1-201ENST00000435098 391 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AC114878.1-201ENST00000441166 358 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 ZNF886P-201ENST00000450781 723 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AL139824.2-201ENST00000458731 1095 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AC022447.4-201ENST00000504053 364 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AC011406.1-201ENST00000512440 370 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AL390123.1-201ENST00000603216 237 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AL034555.1-201ENST00000604816 211 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AC007742.2-201ENST00000618226 398 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 MIR6734-201ENST00000621166 68 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AC231657.1-201ENST00000624313 397 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 AC100810.6-201ENST00000638068 285 ntBASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-37P-201ENST00000362692 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU5B-1-201ENST00000363286 116 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-11P-201ENST00000364234 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-1-201ENST00000383898 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-42P-201ENST00000384165 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-36P-201ENST00000384172 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-4P-201ENST00000384205 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-5P-201ENST00000384238 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-3P-201ENST00000384314 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-2-201ENST00000384627 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-9-201ENST00000384776 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-33P-201ENST00000384793 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNA5SP511-201ENST00000410487 115 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 MTCO1P3-201ENST00000429327 192 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 SNRPGP9-201ENST00000456025 225 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AC006026.2-201ENST00000457376 180 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AP000797.1-201ENST00000478870 387 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 SUMO2P5-201ENST00000506790 245 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AK3P2-201ENST00000507976 429 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 MTND3P5-201ENST00000512798 333 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 SNORA70.12-201ENST00000516084 153 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 SNORA31.10-201ENST00000516482 106 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 DEFB131D-201ENST00000526803 184 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AL137100.2-201ENST00000555786 315 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 EIF1P4-201ENST00000572664 335 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 MIR3146-201ENST00000580367 79 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AL353778.1-201ENST00000603149 408 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RPL21P136-201ENST00000605378 396 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-6P-201ENST00000606623 107 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 MIR15A-201ENST00000607334 83 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 AC073349.3-201ENST00000617616 186 ntBASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.06□□□□□ -2.42
TRAV1-2A0A0B4J238 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 SNORA72.2-201ENST00000365028 127 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 MIR10A-201ENST00000385043 110 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 RNA5SP219-201ENST00000390940 113 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 MTCYBP2-201ENST00000407745 171 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AL445305.1-201ENST00000432577 575 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 MTCYBP39-201ENST00000437562 491 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 CYCTP-201ENST00000504253 315 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-150P-201ENST00000516237 95 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-947P-201ENST00000516264 106 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AC021451.1-201ENST00000523498 1129 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AC115990.1-201ENST00000526957 301 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AC104072.1-201ENST00000568817 668 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AC011195.1-201ENST00000578177 177 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AC090186.1-201ENST00000605991 572 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 AC131159.1-201ENST00000621854 213 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 RMST_7.1-201ENST00000621935 268 ntBASIC-0.07□□□□□ -2.42
TRAV1-2A0A0B4J238 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
TRAV1-2A0A0B4J238 AC092268.1-201ENST00000342691 405 ntBASIC-0.08□□□□□ -2.42
TRAV1-2A0A0B4J238 RNA5SP264-201ENST00000363115 107 ntBASIC-0.08□□□□□ -2.42
TRAV1-2A0A0B4J238 SNORA33-201ENST00000363664 130 ntBASIC-0.08□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-289P-201ENST00000364093 107 ntBASIC-0.08□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-853P-201ENST00000364306 107 ntBASIC-0.08□□□□□ -2.42
TRAV1-2A0A0B4J238 SMIM11P1-201ENST00000369586 178 ntBASIC-0.08□□□□□ -2.42
TRAV1-2A0A0B4J238 SNORA36.2-201ENST00000384004 127 ntBASIC-0.08□□□□□ -2.42
TRAV1-2A0A0B4J238 RNU6-142P-201ENST00000384019 107 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms