Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AP003049.1-201ENST00000529418 457 ntBASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 AC023050.2-201ENST00000544968 387 ntBASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 MIR4452-201ENST00000583004 71 ntBASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 AC009229.3-201ENST00000608056 282 ntBASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 AC072039.2-201ENST00000608883 439 ntBASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 MIR6788-201ENST00000618842 66 ntBASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
TRAV27A0A087WT01 Y_RNA.4-201ENST00000362333 112 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 SNORD31B-201ENST00000364977 69 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 RNU5E-7P-201ENST00000365290 117 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 RNU6-142P-201ENST00000384019 107 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 MIR942-201ENST00000401111 86 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC011233.1-201ENST00000422812 283 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 MTCYBP39-201ENST00000437562 491 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AL360271.2-201ENST00000447710 161 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC104806.1-201ENST00000508720 308 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 RNU4-54P-201ENST00000516428 129 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC087883.1-201ENST00000551882 391 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AL512605.2-201ENST00000592972 256 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC068790.6-201ENST00000602558 258 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC105148.1-201ENST00000604961 409 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 CTHRC1P1-201ENST00000605383 469 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC104465.1-201ENST00000611365 139 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AL356596.1-201ENST00000624230 379 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 AC103706.2-201ENST00000638080 240 ntBASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV27A0A087WT01 RNY4P16-201ENST00000364768 94 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 RNU6-877P-201ENST00000383868 107 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 RNU6-723P-201ENST00000383973 107 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 MTCYBP2-201ENST00000407745 171 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AC007395.1-201ENST00000451333 677 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AL163973.1-201ENST00000484753 577 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 SNORD79.1-201ENST00000516069 84 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 RNU2-10P-201ENST00000516375 211 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 RNU5F-4P-201ENST00000516581 114 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AC123904.2-201ENST00000548059 300 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 MIR4742-201ENST00000581069 85 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 MIR151B-201ENST00000584249 96 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AC016727.2-201ENST00000603988 621 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 RNU6-88P-201ENST00000606801 100 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AP001596.2-201ENST00000608410 312 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AC136475.10-201ENST00000620253 385 ntBASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV27A0A087WT01 AL445523.1-201ENST00000451184 1362 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AL391994.1-201ENST00000254724 282 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 Y_RNA.46-201ENST00000362695 102 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 Y_RNA.164-201ENST00000363709 102 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 Y_RNA.363-201ENST00000365529 113 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 RNU6-413P-201ENST00000384115 107 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 Y_RNA.472-201ENST00000384322 102 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC019070.1-201ENST00000415008 1024 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC060773.1-201ENST00000421698 310 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AL590135.1-201ENST00000422215 156 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC019205.3-201ENST00000424573 156 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 RPL23AP95-201ENST00000426806 265 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 TAF9P1-201ENST00000445421 515 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC016700.2-201ENST00000446011 156 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 TAF9P2-201ENST00000454958 515 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AL049829.1-201ENST00000465411 156 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC092991.1-201ENST00000477176 376 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC015911.1-201ENST00000495111 156 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 RNU4-57P-201ENST00000515980 135 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 RNU6-123P-201ENST00000516163 102 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 RNU6-856P-201ENST00000516959 98 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 ADI1P3-201ENST00000549509 470 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 MIR5087-201ENST00000635826 76 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC091948.2-201ENST00000636510 279 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AC106858.1-201ENST00000637497 429 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 AL442644.1-201ENST00000454390 3105 ntBASIC0.35□□□□□ -2.35
TRAV27A0A087WT01 SNORA33-201ENST00000363664 130 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 RNU6-534P-201ENST00000364877 106 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 RNU6-969P-201ENST00000383900 105 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 MIR499A-201ENST00000384903 122 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 AF228730.1-201ENST00000397972 663 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 RNU6-1054P-201ENST00000411293 104 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 HMGN1P12-201ENST00000499125 195 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 AC116353.3-201ENST00000511215 249 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms