Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ClcnkaQ9WUB7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Mir770-201ENSMUST00000103252 94 ntBASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClcnkaQ9WUB7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 AA414768-201ENSMUST00000121924 1257 ntBASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Gm25016-201ENSMUST00000158399 131 ntBASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ClcnkaQ9WUB7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ClcnkaQ9WUB7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClcnkaQ9WUB7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClcnkaQ9WUB7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.83□□□□□ -0.03
ClcnkaQ9WUB7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClcnkaQ9WUB7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.83□□□□□ -0.03
ClcnkaQ9WUB7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ClcnkaQ9WUB7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ClcnkaQ9WUB7 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClcnkaQ9WUB7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms