Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem88Q9D0N8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.82□□□□□ -0.36
Tmem88Q9D0N8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem88Q9D0N8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tmem88Q9D0N8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem88Q9D0N8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem88Q9D0N8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tmem88Q9D0N8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Phf7-203ENSMUST00000226565 1971 ntBASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tmem88Q9D0N8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Gm42569-201ENSMUST00000200539 472 ntBASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tmem88Q9D0N8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tmem88Q9D0N8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms