Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lrrc40Q9CRC8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Gm9987-201ENSMUST00000069768 567 ntBASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lrrc40Q9CRC8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Gm9013-201ENSMUST00000132939 882 ntBASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lrrc40Q9CRC8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.02■□□□□ 0.15
Lrrc40Q9CRC8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrc40Q9CRC8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrc40Q9CRC8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrc40Q9CRC8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrc40Q9CRC8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Lrrc40Q9CRC8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrc40Q9CRC8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lrrc40Q9CRC8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lrrc40Q9CRC8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Gm6858-201ENSMUST00000208582 1468 ntBASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16■□□□□ 0.15
Lrrc40Q9CRC8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms