Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.95■□□□□ 0.46
Ccdc43Q9CR29 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc43Q9CR29 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc43Q9CR29 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc43Q9CR29 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc43Q9CR29 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Mir7071-201ENSMUST00000184847 69 ntBASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc43Q9CR29 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Gm9987-201ENSMUST00000069768 567 ntBASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc43Q9CR29 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc43Q9CR29 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Gm18421-201ENSMUST00000204122 625 ntBASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc43Q9CR29 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms