Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scrt1Q99M85 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.11□□□□□ -0.15
Scrt1Q99M85 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.11□□□□□ -0.15
Scrt1Q99M85 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scrt1Q99M85 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Gm29707-201ENSMUST00000196325 491 ntBASIC14.1□□□□□ -0.15
Scrt1Q99M85 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.1□□□□□ -0.15
Scrt1Q99M85 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.09□□□□□ -0.15
Scrt1Q99M85 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.09□□□□□ -0.15
Scrt1Q99M85 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Gm7063-201ENSMUST00000186840 981 ntBASIC14.09□□□□□ -0.15
Scrt1Q99M85 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.09□□□□□ -0.15
Scrt1Q99M85 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.09□□□□□ -0.15
Scrt1Q99M85 Psmb5-202ENSMUST00000227257 622 ntBASIC14.09□□□□□ -0.15
Scrt1Q99M85 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Gm15590-201ENSMUST00000078419 552 ntBASIC14.09□□□□□ -0.15
Scrt1Q99M85 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scrt1Q99M85 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms