Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clp1Q99LI9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.97■□□□□ 0.31
Clp1Q99LI9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clp1Q99LI9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clp1Q99LI9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clp1Q99LI9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clp1Q99LI9 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Clp1Q99LI9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.96■□□□□ 0.31
Clp1Q99LI9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.96■□□□□ 0.31
Clp1Q99LI9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clp1Q99LI9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clp1Q99LI9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Clp1Q99LI9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clp1Q99LI9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Clp1Q99LI9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Clp1Q99LI9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Gm14701-201ENSMUST00000117156 348 ntBASIC16.95■□□□□ 0.3
Clp1Q99LI9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Gm17271-201ENSMUST00000165535 355 ntBASIC16.95■□□□□ 0.3
Clp1Q99LI9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.95■□□□□ 0.3
Clp1Q99LI9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.95■□□□□ 0.3
Clp1Q99LI9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.95■□□□□ 0.3
Clp1Q99LI9 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.95■□□□□ 0.3
Clp1Q99LI9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clp1Q99LI9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Gm15358-201ENSMUST00000119249 520 ntBASIC16.94■□□□□ 0.3
Clp1Q99LI9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.94■□□□□ 0.3
Clp1Q99LI9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.94■□□□□ 0.3
Clp1Q99LI9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clp1Q99LI9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.93■□□□□ 0.3
Clp1Q99LI9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clp1Q99LI9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms