Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb2Q91XX7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Odf3b-204ENSMUST00000227834 930 ntBASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb2Q91XX7 Phf7-203ENSMUST00000226565 1971 ntBASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhgb2Q91XX7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms