Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.7■□□□□ 0.26
Trim60Q8VI40 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.7■□□□□ 0.26
Trim60Q8VI40 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim60Q8VI40 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Gm10252-201ENSMUST00000209541 832 ntBASIC16.69■□□□□ 0.26
Trim60Q8VI40 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.69■□□□□ 0.26
Trim60Q8VI40 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim60Q8VI40 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim60Q8VI40 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim60Q8VI40 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.68■□□□□ 0.26
Trim60Q8VI40 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim60Q8VI40 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.67■□□□□ 0.26
Trim60Q8VI40 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.67■□□□□ 0.26
Trim60Q8VI40 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Mir1668-201ENSMUST00000184114 107 ntBASIC16.67■□□□□ 0.26
Trim60Q8VI40 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim60Q8VI40 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms