Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Atf7Q8R0S1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Atf7Q8R0S1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Atf7Q8R0S1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atf7Q8R0S1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Gm15794-201ENSMUST00000120182 631 ntBASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atf7Q8R0S1 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.02■□□□□ 0.63
Atf7Q8R0S1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Atf7Q8R0S1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Atf7Q8R0S1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Atf7Q8R0S1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Atf7Q8R0S1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms