Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cystm1Q8K353 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.16□□□□□ -0.78
Cystm1Q8K353 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Gm10698-201ENSMUST00000182663 604 ntBASIC10.16□□□□□ -0.78
Cystm1Q8K353 Gm38285-201ENSMUST00000192928 922 ntBASIC10.16□□□□□ -0.78
Cystm1Q8K353 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.16□□□□□ -0.78
Cystm1Q8K353 AC153881.1-201ENSMUST00000214448 284 ntBASIC10.16□□□□□ -0.78
Cystm1Q8K353 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cystm1Q8K353 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Alkbh1-212ENSMUST00000185301 408 ntBASIC10.15□□□□□ -0.78
Cystm1Q8K353 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cystm1Q8K353 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cystm1Q8K353 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cystm1Q8K353 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cystm1Q8K353 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cystm1Q8K353 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Cystm1Q8K353 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cystm1Q8K353 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cystm1Q8K353 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cystm1Q8K353 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cystm1Q8K353 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms