Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc28aQ8CEI3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Gm18421-201ENSMUST00000204122 625 ntBASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccdc28aQ8CEI3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc28aQ8CEI3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc28aQ8CEI3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc28aQ8CEI3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc28aQ8CEI3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ccdc28aQ8CEI3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc28aQ8CEI3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccdc28aQ8CEI3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc28aQ8CEI3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Gm4217-201ENSMUST00000182243 1002 ntBASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc28aQ8CEI3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc28aQ8CEI3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc28aQ8CEI3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms