Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb7Q8CDY9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhb7Q8CDY9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Gm11434-201ENSMUST00000122379 629 ntBASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhb7Q8CDY9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb7Q8CDY9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb7Q8CDY9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb7Q8CDY9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.21■□□□□ 0.18
Pcdhb7Q8CDY9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Pcdhb7Q8CDY9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhb7Q8CDY9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb7Q8CDY9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms