Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Gm6443-201ENSMUST00000203599 874 ntBASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps53Q8CCB4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Gm13186-201ENSMUST00000118031 316 ntBASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps53Q8CCB4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.74■□□□□ 0.59
Vps53Q8CCB4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Gm15794-201ENSMUST00000120182 631 ntBASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps53Q8CCB4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps53Q8CCB4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps53Q8CCB4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms