Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.49□□□□□ -0.09
Lysmd4Q8CC84 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lysmd4Q8CC84 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Gm18421-201ENSMUST00000204122 625 ntBASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lysmd4Q8CC84 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Timm23-208ENSMUST00000226683 750 ntBASIC14.46□□□□□ -0.09
Lysmd4Q8CC84 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms