Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps9d1Q8C190 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps9d1Q8C190 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps9d1Q8C190 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Actl10-202ENSMUST00000226583 1501 ntBASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Vps9d1Q8C190 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Vps9d1Q8C190 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms