Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpne3Q8BT60 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpne3Q8BT60 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Gm13559-201ENSMUST00000120476 863 ntBASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Mir5130-201ENSMUST00000175160 84 ntBASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Gm44450-201ENSMUST00000199528 114 ntBASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Gm18421-201ENSMUST00000204122 625 ntBASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Cpne3Q8BT60 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpne3Q8BT60 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
Cpne3Q8BT60 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpne3Q8BT60 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Gm11336-201ENSMUST00000118168 334 ntBASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cpne3Q8BT60 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cpne3Q8BT60 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms