Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Gm42569-201ENSMUST00000200539 472 ntBASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Gm4974-201ENSMUST00000209974 875 ntBASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smco3Q8BQM7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Smco3Q8BQM7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Smco3Q8BQM7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Smco3Q8BQM7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smco3Q8BQM7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smco3Q8BQM7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smco3Q8BQM7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Smco3Q8BQM7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Gm13148-201ENSMUST00000118892 745 ntBASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smco3Q8BQM7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smco3Q8BQM7 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smco3Q8BQM7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms