Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc40Q8BI79 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc40Q8BI79 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc40Q8BI79 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Gm27389-201ENSMUST00000183622 195 ntBASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc40Q8BI79 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Gm11336-201ENSMUST00000118168 334 ntBASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Gm18101-201ENSMUST00000215769 548 ntBASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc40Q8BI79 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc40Q8BI79 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms