Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Vrk1Q80X41 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.37■□□□□ 0.05
Vrk1Q80X41 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.37■□□□□ 0.05
Vrk1Q80X41 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.37■□□□□ 0.05
Vrk1Q80X41 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vrk1Q80X41 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.36■□□□□ 0.05
Vrk1Q80X41 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.36■□□□□ 0.05
Vrk1Q80X41 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Gm7230-201ENSMUST00000173026 815 ntBASIC15.36■□□□□ 0.05
Vrk1Q80X41 Gm8000-201ENSMUST00000188378 592 ntBASIC15.36■□□□□ 0.05
Vrk1Q80X41 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vrk1Q80X41 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.35■□□□□ 0.05
Vrk1Q80X41 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.35■□□□□ 0.05
Vrk1Q80X41 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.35■□□□□ 0.05
Vrk1Q80X41 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vrk1Q80X41 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Gm15173-201ENSMUST00000122049 433 ntBASIC15.34■□□□□ 0.05
Vrk1Q80X41 Gm12497-201ENSMUST00000138778 237 ntBASIC15.34■□□□□ 0.05
Vrk1Q80X41 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms