Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp8Q80U87 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Usp8Q80U87 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Usp8Q80U87 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Usp8Q80U87 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp8Q80U87 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp8Q80U87 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp8Q80U87 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp8Q80U87 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.2■□□□□ 0.18
Usp8Q80U87 Gm13436-201ENSMUST00000120418 567 ntBASIC16.2■□□□□ 0.18
Usp8Q80U87 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.2■□□□□ 0.18
Usp8Q80U87 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp8Q80U87 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp8Q80U87 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp8Q80U87 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.19■□□□□ 0.18
Usp8Q80U87 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp8Q80U87 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.19■□□□□ 0.18
Usp8Q80U87 Gm18115-201ENSMUST00000221209 621 ntBASIC16.19■□□□□ 0.18
Usp8Q80U87 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.19■□□□□ 0.18
Usp8Q80U87 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp8Q80U87 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Usp8Q80U87 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Usp8Q80U87 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.18■□□□□ 0.18
Usp8Q80U87 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.18■□□□□ 0.18
Usp8Q80U87 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Usp8Q80U87 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Usp8Q80U87 Actl10-202ENSMUST00000226583 1501 ntBASIC16.18■□□□□ 0.18
Usp8Q80U87 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Usp8Q80U87 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Usp8Q80U87 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Usp8Q80U87 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Usp8Q80U87 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Usp8Q80U87 Phf7-203ENSMUST00000226565 1971 ntBASIC16.17■□□□□ 0.18
Usp8Q80U87 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.17■□□□□ 0.18
Usp8Q80U87 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp8Q80U87 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Usp8Q80U87 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.17■□□□□ 0.18
Usp8Q80U87 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Usp8Q80U87 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms